| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_1252 |
|---|
| Symbol | |
|---|
| ID | 8828214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 1200608 |
|---|
| End bp | 1201651 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_003483622 |
|---|
| Protein GI | 289596926 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAATG AGATATTGTT AAAGGTTGAA GATCTTCATA CTTATTTTTA CACTTATGAG
GGAGTTGTAA AAGCTGTGGA TGGTGTTTCT TTCTTTGTAA AAAAGGGGGA AATTTTCGGG
CTCGTAGGTG AAACTGGTTG CGGAAAATCA GTAACTGCTC TTTCTGTAAT TGGGTTAATT
GATGAGCCTG GAAAGATAGA GAGCGGAAAG ATAATTTTCC AAGGGAAGAA CCTTAGAGAG
TTACCAGAGG ATGAAATGAG AAAAATTAGA GGTAAAGGTA TAAGTATGAT ATTTCAAGAG
CCTATGACTG CTTTAAATCC TGTGTACACC ATAGGTGATC AAATTCTAGA GATAATCCTG
TTGCATAAAT ATGGTATTGA AAATATCAAA AAAGCTCCAA AAGATATTAA AAAGAAGGAA
AGAAAAAATG TTATAGATAT GTTGAGGTTA GTTAGGATGC CTGATCCGGA GAGAGCTATA
GATAGCTATC CCCACGAGTT GAGTGGAGGA ATGAGACAAA GGGCTATGAT TGCAATGATG
CTCGCTACCG AACCCTCTTT GCTTATAGCA GATGAACCTA CAACAGCTTT AGATGTGACT
GTTCAAGCTC AGATTTTAAA TATCCTACTG GATATGAGAG AGAAATTGGG GATATCAATA
ATTCTTATTA CGCATGATTT GAGTGTTGTA GCAGATGTAT GCGATAGAGT AGCGGTGATG
TACGCTGGAA ATATTGTGGA GATGGCAGAT GTTTATACAA TTTTTAAAAA TCCTGTACAC
CCCTATACCA GGGGACTGAT GCAAGCTATA CCCAGTATAG CTGAAAAGAA AGAGGAATTG
AAATATATCA AAGGTTCTGT ACCCAATCTA ATATACCCAC CTCCTGGATG TAGATTTCAT
CCAAGGTGCG AGTATGCCCA AGATATATGC AAGAAGGAGA AACCTAAGTT AGTAGAGATA
GAGCCAGGAC ACTATGTCGC TTGCCATTTT GCTAAGGAAT TCTTTGAAAA GATCAAGGAA
ACGGAGGGTG AGGATAATGA GTGA
|
|---|
| Protein sequence | MDNEILLKVE DLHTYFYTYE GVVKAVDGVS FFVKKGEIFG LVGETGCGKS VTALSVIGLI
DEPGKIESGK IIFQGKNLRE LPEDEMRKIR GKGISMIFQE PMTALNPVYT IGDQILEIIL
LHKYGIENIK KAPKDIKKKE RKNVIDMLRL VRMPDPERAI DSYPHELSGG MRQRAMIAMM
LATEPSLLIA DEPTTALDVT VQAQILNILL DMREKLGISI ILITHDLSVV ADVCDRVAVM
YAGNIVEMAD VYTIFKNPVH PYTRGLMQAI PSIAEKKEEL KYIKGSVPNL IYPPPGCRFH
PRCEYAQDIC KKEKPKLVEI EPGHYVACHF AKEFFEKIKE TEGEDNE
|
|---|
| |