Gene Aboo_1234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1234 
Symbol 
ID8828196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1186206 
End bp1187348 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content39% 
IMG OID 
ProductCBS domain containing membrane protein 
Protein accessionYP_003483604 
Protein GI289596908 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCTG GTGAGATAAA AGTTAAGGAT GTTATGACAA AGGATGTTGT TGTAGCTAAA 
CTTGGAGATA CCATATCTAA GGCAATAAGC AAGATGCAGG AGCATGGATT TCACGAACTG
CCTGTGGTGA ATGATAGGGG CGAGCTTGTT GGATATGTGA ATTACAGAAC ATTGATAAGG
AGAAAGAGTT TATCTCTATA CTCCCGTGTG GAAAATATTA TGGTAAAACC TCCAGTTTTA
GATCCAGATG CAAGCATAGA GGATGCTGTT AAATTGATGA TTGATGCAGG CTATCGCTCT
CTGCCAATTG TGGAAAAGAA TAAGCTCGTG GGCATAATAT CAAGAACGGA TATAATAAAG
CTTGTTCCCA AAATGAAGGA TGTTGCTAAT ATTCCAGTGG AGGATGTCAT GACAAGTGAG
CCGGAGCTTG TTGAGGAAGA TTCGCCCATA CAATATGCAG TTGATATAAT GAAAAAACTT
GGCGAGATGA GCGTGCCTGT GGTGGATGAG AATAGAAAAC TTGTGGGTAT AGTGCATATG
AGAGATGCTG CTAAAGCAGT ATGGAGAGAG AAAGAGAGGG CAAGTTTGGG AGAGGTATCT
GGAGAGAAGA AAAAAGTTCA AATTTTGGTA AAAGAAATAA TGGTTCCTCC AGTTTATGTT
TCCGAAGATT CTATTTTAAA GGATGCTGTA GAGAAAATGA TTGAATTTCA CTCATCCATA
TGCGCTGTTA TAGATAAAAA AAGTGTGCCA ATTGGAGTGA TATCTCAAAG AGATGTAATA
GAAGCGATAT TGAGGGAGGG AAAACAAGAA GGTGTGTTCG TCCAAATAAC TGGATTGGAC
ATAGAGGATA TGGAGCCGTA TCAAATAATT TACAACATGG TAGAAGAGTT TCTGCACAAA
ATCAATCGCT TTAAGGAATT CAAGCCCCAG CTCCTAACAT TCCATGTTGA GGAGCACCAT
ATCAGTGGAA AAGAGATAAA ATACAGCGTG AGAGCCAGAT TAACTACAGA CCGCAGGCTC
TTCTTTGCCA GAAGCTATGA TTGGAATATT TACAGCGCAT TTAAAGATGT TTTGGAGATA
CTAGAGAGAA ATGTGAAGAA AGAAAGAGAC AAGCTTCTTG AATTCAGACG GGAGACCCTA
TGA
 
Protein sequence
MEPGEIKVKD VMTKDVVVAK LGDTISKAIS KMQEHGFHEL PVVNDRGELV GYVNYRTLIR 
RKSLSLYSRV ENIMVKPPVL DPDASIEDAV KLMIDAGYRS LPIVEKNKLV GIISRTDIIK
LVPKMKDVAN IPVEDVMTSE PELVEEDSPI QYAVDIMKKL GEMSVPVVDE NRKLVGIVHM
RDAAKAVWRE KERASLGEVS GEKKKVQILV KEIMVPPVYV SEDSILKDAV EKMIEFHSSI
CAVIDKKSVP IGVISQRDVI EAILREGKQE GVFVQITGLD IEDMEPYQII YNMVEEFLHK
INRFKEFKPQ LLTFHVEEHH ISGKEIKYSV RARLTTDRRL FFARSYDWNI YSAFKDVLEI
LERNVKKERD KLLEFRRETL