Gene Aboo_1228 details

Gene Information

• Locus tag: Aboo_1228
• ID: 8828190
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 1179534
• End bp: 1180136
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 37%
• Product: CDP-alcohol phosphatidyltransferase
• Protein accession: YP_003483598
• Protein GI: 289596902

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTACTAA ATAAATATAG AAAGAATGTT GATTCGCTTC TAACATCATT ATCCAAACCA 
TTTATGAAAA TGCATCCTAA TACCATAACA TTAATCTCTC TTTTTATATC ATTTCTCGCT 
GCCATATCTT ATTATCTCAC CCATATTAGT TCATATTTTC TATTTGCGTT TCTTGCATTC 
TTAATCCTCG CATCATTGAT GGATGCTATT GATGGTAAAG TTGCCAGATT ACGGGGCATA 
TCTTCAAATA GGGGGGATTT TCTTGATCAT CTAATTGATA GGTATGCGGA TATGATAATA 
ATAATTGGGA TATCTTTAAG TCCATATTCA ACCCCACTAA TCGGCCTATT TGCATTGTCG 
GGCGTGTTTA TGACCAGCTA TGTGGGCACA CAAGCACAGG CAGTGGGAGT TGGAAGAATA 
TACGGGGGTA TCCTTGGCAG AGCAGATAGA TTAGTGATAT TGATGCTCCT GCCCATAATA 
CAATTTTTCT GGTGGGGCTA CTATTTCTCC ATATCCTCTT GGATTTTAAT ACTATTTGCA 
GTTCTTGGGC ATATAACGGC TATTCAGAGG ATTCTCTCTG CCTGGAAATC CATTCCTTCT 
TAA 

 

Protein sequence

MVLNKYRKNV DSLLTSLSKP FMKMHPNTIT LISLFISFLA AISYYLTHIS SYFLFAFLAF 
LILASLMDAI DGKVARLRGI SSNRGDFLDH LIDRYADMII IIGISLSPYS TPLIGLFALS 
GVFMTSYVGT QAQAVGVGRI YGGILGRADR LVILMLLPII QFFWWGYYFS ISSWILILFA 
VLGHITAIQR ILSAWKSIPS