Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_1142 |
Symbol | |
ID | 8828102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | + |
Start bp | 1093317 |
End bp | 1094693 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | |
Product | MATE efflux family protein |
Protein accession | YP_003483513 |
Protein GI | 289596817 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAAA AAGTAAACAA AAATGTGAAA ACACTCCTTG GAGATCCTAA AAAAGCCATT ATAAAACTGG CAATACCGAT AATAATAGGT GGATTTGTTC AAACCCTGTA CAATTTTGTG GACGGGATAT GGGTCTCTGG ACTGGGTCAA GATTCTCTGG CCGCTGTGGG TATATTCATG CCTTTTATGA TGATTTTATC CGCCTTAGCA ATGGGTATCG GTGTTGGAGG CAGCTCCGCA ATATCACGAT CCATAGGGGC TAAAAATAGA AAGAGAGCGG GAAATATCGG GGACCATACA ATTATAATAG GCACATTAAT AGGAATGCTC ATAGGATTTT CAATGTTTCC ATTCCTACAC TCCATATTCA TTTCAATGGG GGCAGGCCCA AAAACGGCCG AATTAGCAAC TCAATACGGA CAAATAATCA TAATTGGCTC ACCTTTTATG TTCCTATCCA GTTTGGGAAA CGCCATACTT CGTGGGGAGG GGGATACTAA GAGGGCTATG TATGTGATGT TAATAAGTTC GATTCTGAAC ATAGTTCTTG ACCCCATCTT CATTTATACT CTTAATATGG GCGTTGTAGG TGCTGCTGTG GCAACGATCA TTTCTATCAT CCTCTCAGCC CTCGTAATAA TGTACTGGCT AATTGTGAAG AAAGATACCT ATGTACAGCT TCGCCTCAGA TACTTTAAAA TCAAAAAGGA TATAATCAAG GAGATTTTCA AAGTTGGGTT GCCTTCTTCC CTTTCTCAGC TCTCTATGTC ATTCACAATG ATAATTTTGA ACACAATAGT TATTATGGCA GGCGGAGATT ACGGCATGGC AGTGTTCTCT GGTGGATGGA GAATTGTTAT GCTCGCCATA GTTCCCCTTA TGGGATTCGC TGCTGCAGTT ACATCGGTTA CAGGTGCTGC CTATGGGGCA AGAAACATAG AAAATTTAAA AACTGGTTAT TACTACGCAA TCAAAATAGG AACTGTAGTT GGAGTGATAA CAGGGGTGAT AATAGGAGTA TTTGCTCCTC AATTTACTTA TCTATTCACA TACTCGGAGA GCTCATCACA TTTAGCTCCG GGAATAATCG AGTTCCTGCA TTACATAGTG CTTTACTTCC CGGGAGTTGC CTCTGGGATG CTCACCTCAA GCATGTTTAG GGGTATAGGC AAAGGCACAT ACTCTCTTCT TCAAACTATA ATAAGGACTC TAATTCTTCA AATTGTATTT GCATACTTCA TCGGAATATA TTTGAACATG GGGTTACCTG GCATCTGGAT TGGCATTGTT CTTGCGAACT GGTGCGCATC CATATTTGCA TTGCTATGGG GAAGATGGGT AATAAAGAAA ATAGAGATCT CTTGGGCAAC TGGATAA
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Protein sequence | MNEKVNKNVK TLLGDPKKAI IKLAIPIIIG GFVQTLYNFV DGIWVSGLGQ DSLAAVGIFM PFMMILSALA MGIGVGGSSA ISRSIGAKNR KRAGNIGDHT IIIGTLIGML IGFSMFPFLH SIFISMGAGP KTAELATQYG QIIIIGSPFM FLSSLGNAIL RGEGDTKRAM YVMLISSILN IVLDPIFIYT LNMGVVGAAV ATIISIILSA LVIMYWLIVK KDTYVQLRLR YFKIKKDIIK EIFKVGLPSS LSQLSMSFTM IILNTIVIMA GGDYGMAVFS GGWRIVMLAI VPLMGFAAAV TSVTGAAYGA RNIENLKTGY YYAIKIGTVV GVITGVIIGV FAPQFTYLFT YSESSSHLAP GIIEFLHYIV LYFPGVASGM LTSSMFRGIG KGTYSLLQTI IRTLILQIVF AYFIGIYLNM GLPGIWIGIV LANWCASIFA LLWGRWVIKK IEISWATG
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