Gene Aboo_1139 details

Gene Information

• Locus tag: Aboo_1139
• ID: 8828099
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: -
• Start bp: 1091455
• End bp: 1092084
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 45%
• Product: orotidine 5'-phosphate decarboxylase
• Protein accession: YP_003483510
• Protein GI: 289596814

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.00457344
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGGAC TAATACTCGC TTTAGATGTA ACGGACAGAG AAAAGGCGAT TAATATTGCA 
AATGAGGTTG CGGATTATCT ACACGCCATA AAAATTGGCT GGCCTCTTGT AATGGCAGCA 
GGTATGGATA TCATTGATTC ACTTTCGCAA ATAAAACCGA TAATATGCGA TTTCAAGGTT 
GCAGATATAC CAAATACCAC AAAACTTATA GTTAGGGAGG CAAGAAACCA TGGGGCAATG 
GGCATTATTG TTCACGGGTT TGTGGGTAGA GATTCCATCA AAGCGGCCGT AGACGAGGCA 
GGAAAGATGA AAGTTTATGT TGTAGCTGAA ATGTCACATC CAGGAGCACT TGATTTTATG 
CAAAAGCATA CTGATGATAT TGTTTTGATG GCCAAGGAGG TGGGAGCGGC AGGATTGATT 
GCTCCTGCCA CTAGGCCTGA AAGAATTACA CACATACGCT CTCTTGCAGG TGATATGGAG 
ATACTAGCCC CCGGGGTTGG GGCTCAGGGT GGCAGTGCTA AGGAAGCGAT AGAGGCAGGT 
GCTACACATA TCATAGTTGG AAGGAGAATA TATGAGGCAA ACGAGCCTGC CAAGGCAGCC 
AAGGCACTCT ACGATGAGCT CACACTTTAA 

 

Protein sequence

MAGLILALDV TDREKAINIA NEVADYLHAI KIGWPLVMAA GMDIIDSLSQ IKPIICDFKV 
ADIPNTTKLI VREARNHGAM GIIVHGFVGR DSIKAAVDEA GKMKVYVVAE MSHPGALDFM 
QKHTDDIVLM AKEVGAAGLI APATRPERIT HIRSLAGDME ILAPGVGAQG GSAKEAIEAG 
ATHIIVGRRI YEANEPAKAA KALYDELTL