Gene Aboo_1117 details

Gene Information

• Locus tag: Aboo_1117
• ID: 8828077
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 1072016
• End bp: 1072633
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 39%
• Product: translation initiation factor aIF-2, beta subunit
• Protein accession: YP_003483488
• Protein GI: 289596792

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.000692895
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGATA TGTACGATTA CGATTCTTTA CTTGCCCGTG TTCGTGAGGC TTTGCCTGAA 
GAGATTAAGA ATAGAGAGAG ATTTGAAGTT CCAAAGGTAG AAGTAATTTA TGAAGGAAAG 
AACACAATTA TCAAGAATTT TATGGATATT GTTAAGAGGA TAAACAGGGA CCAAATGCAT 
GTCTATAAAT ATCTTATGAG AGAACTTGGA ACCGCTGGAA GTATTCAGGG AGATAGGCTG 
GTTTTAAAAG GGCGTATTTC ACAATCTCTC ATTCAAAGCA GAATTGATAG TTATGTAAAG 
ACCTATGTAA TATGCTATGA ATGCGGCTCT CCCGATACAG AGCTTAGAAA GGAGGGAAGG 
GTTGAGATCC TAGTGTGCAA GGCTTGCGGT GCAATAAGGC CTGTGCATGG AAAGGTGGCT 
GTGAAATTCA GCATGTCCAA GCTTGAAGAG GGAAAGGTTT ACAATGTAGA AATCACTGAT 
TTGAGTAGAG ATGGAGATGG CATAGCAAAA TATGGTGATT ATACTATTTA TGTTCCTGGT 
GCAAGAAAGG GAGAGCAGGT AAAAGTAAAA ATTGTTAAAA TAAAGAAAAA TGTGGCGTTT 
GGGAGGATAG TCAGCTGA 

 

Protein sequence

MTDMYDYDSL LARVREALPE EIKNRERFEV PKVEVIYEGK NTIIKNFMDI VKRINRDQMH 
VYKYLMRELG TAGSIQGDRL VLKGRISQSL IQSRIDSYVK TYVICYECGS PDTELRKEGR 
VEILVCKACG AIRPVHGKVA VKFSMSKLEE GKVYNVEITD LSRDGDGIAK YGDYTIYVPG 
ARKGEQVKVK IVKIKKNVAF GRIVS