| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_1116 |
|---|
| Symbol | |
|---|
| ID | 8828076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | + |
|---|
| Start bp | 1070535 |
|---|
| End bp | 1071968 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | |
|---|
| Product | phosphoesterase RecJ domain protein |
|---|
| Protein accession | YP_003483487 |
|---|
| Protein GI | 289596791 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0000172525 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAATCTT TTTTAAAGAG GGCTAAGGAG ATTGCGAGGA AGATTGAAGA AGCAGATAAG
ATAGTTATTG TAAGCCACAT AGATGCAGAT GGCATAACTT CTGGTAGCAT AGCAGCGAGA
GCTTTGCAAA GATTAAACAA GGATTTTCGC ATAGATTTTG TAAAGCAGCT TGATGAGAGA
AAAATTGAAG AGTTGAAGGA TGAGAACCCG GATTTAGTAT GGTTTACAGA CCTTGGAAGT
GGTATGGTTC ATCTAATGTA TGGACTAGAT GCGGTTATAA CCGACCATCA TGTGCCCAGT
AGTTTGAATG TAATTGTGCC AAAGAAAGCA AGAAAAAATC TAACTTCATT TTTTGAAGAA
TTATCAAAGA GCGATGTCTT GCAGCTCAAT CCTCACATAT TTAATAGAAA TGGAGCTGTG
GATATAAGTG GGGCAGGAAC AACATACTTG GTTGCAAGGG AATTGGATAG GAGAAATGTG
GATTTGAGTC CCCTCGCAAT TGTTGGAGCC ATTGGGGACA TGCAAGATAC TGAAAATTTA
AGGCTCACAG GCACAAATAG GGTGATTTTG AAAGAGGCAA AAGAGCACAA TTATGTGGAT
TTCTTCTTAG ATGCAAGGTT CTTTGGAAGA GAAACCAAGC CCGTTTACAA GATGTTACAG
TTCTCTACAG ACCCTCTACT TCCCACCCTA ACAGGTGATG AAAAGAGATG CATAGCATTT
CTGAAGGAGC TGGGAATACC CTTAAAGAGG GATAGATGGA GAAGATGGAT CGATTTGACA
AAAGAGGAAA AAAAATTGAT ACTTTCAGAG CTTGTTAAAC TCATTTTGAG AATGGGCTAC
GGTTATGAGA TGGCTAAAAG ATTAATAGGA GAGGTTTATA TTTTGAAGAA TGAAGAAAGG
GGTACTCCAT TGAGGGATGC AAAAGAATTT GCCACATTGC TGAATGCTTG TGGCAGATAC
AACAAAGCAT TTATTGGCTA TCAAGTATGC CTAGGAGATA GAGATGAGTA CTACAAAAAG
GCATTAAATA TGCTAAATCA TCATAGAAGA AACTTGGTTG ATGGTGTGAA TTTTGTTAAG
GAGATAGGAA TAGTTAAAAG AGAGTTTTTG CAATACTTCC ATGCAGGCGA AAATATCAAC
GAGAACATAG TTGGCATAGT AGCTTCAATG ATACTCACAG AGGAGGGAAA TAGGGAATTG
CCCATAATCG CCTTCGCGAA CAGCGAGGAT GGGAATATAA AGGTATCCGC TAGGGCTCCA
AGAGCGCTTG TGGATAAGGG GTTGAATCTA TCAATAATAA TGCGTGAAGC TTCCGCAGAA
GTTGGTGGCT ATGGAGGAGG ACATAATATT GCAGCAGGTG CTTCCATACC TAAGGGCAAA
GAGGATGAGT TCTTGGATAT CGTGGAAAAT ATGATAAAAA AGCAACTTGA ATGA
|
|---|
| Protein sequence | MESFLKRAKE IARKIEEADK IVIVSHIDAD GITSGSIAAR ALQRLNKDFR IDFVKQLDER
KIEELKDENP DLVWFTDLGS GMVHLMYGLD AVITDHHVPS SLNVIVPKKA RKNLTSFFEE
LSKSDVLQLN PHIFNRNGAV DISGAGTTYL VARELDRRNV DLSPLAIVGA IGDMQDTENL
RLTGTNRVIL KEAKEHNYVD FFLDARFFGR ETKPVYKMLQ FSTDPLLPTL TGDEKRCIAF
LKELGIPLKR DRWRRWIDLT KEEKKLILSE LVKLILRMGY GYEMAKRLIG EVYILKNEER
GTPLRDAKEF ATLLNACGRY NKAFIGYQVC LGDRDEYYKK ALNMLNHHRR NLVDGVNFVK
EIGIVKREFL QYFHAGENIN ENIVGIVASM ILTEEGNREL PIIAFANSED GNIKVSARAP
RALVDKGLNL SIIMREASAE VGGYGGGHNI AAGASIPKGK EDEFLDIVEN MIKKQLE
|
|---|
| |