Gene Aboo_1091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1091 
Symbol 
ID8828049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1047786 
End bp1051391 
Gene Length3606 bp 
Protein Length1201 aa 
Translation table11 
GC content43% 
IMG OID 
ProductDNA-directed RNA polymerase subunit B 
Protein accessionYP_003483462 
Protein GI289596766 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00610767 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACCA TAGTGGATAT TTTGTTTAAG AAAAGTGTAG TGAATCACCA TATTGCGTCA 
TACAACGATT TGATACCCAC ACCAGATAAT CCAAATAGTG TGATGCAAGA GATTGTTGAT
ACTACAAAGG TTACAGATGA GGACCCTCCG GGAGTTATAA CATTAGATAG AACAAAAACC
GGTGGAAAGA CAATAAAAAT AGTTTTTGGA AGAAACAATG ACTACTGGGA TGTTAATGAG
CCCACCATAA GGATAGGAAG GCCTGAGATT AAAGAAGCAA CGGGAGCAAC TGTTCAGATA
ACGCCTATGG AAGCAAGGTT AAGGGATTTA AGTTACTTAG CTCCATTGTA TCTAAAGATA
AAAGTTTTAG AATGTGATGA TGCAGGATGC TATGAAAGAG AGCCAGAAAT GGTTAAGATA
GGAGATTTTC CTGTGATGGT AAAATCCAAG ATTTGCACCC TCCACGAGGA TAACATTGAC
GATTATCTCG ATAGCATCTC AAAAGATAAG GATATACTCA ACTGGCCCTA CAAGCAGAAA
TTGGAATATG TGGGCGAGGA CCCCGATGAC CCGGGTGGTT ATTTTATAAT TGGTGGAAGT
GAGAGGGTTC TCGTATCTCT AGAGGACCTT GCTCCAAATA GGGTGTTAGT AGAGAAAAAC
GAGAGATATA ACACTGTTGT GGAGACGGCC AAAGTATTCT CACAGCGTAG GGGTTATAGG
GCCCTAACAA TTATGGAAAA GAAGAGCGAT GGTATTATTG TAGTTTCAGT TCCTGCGGTG
GCTGGAACAA TACCTCTGGT AATTTTGATG AAGGCTCTTG GACTGGAGAA GGATCAAGAT
ATCTACAGAG CGATTGTAAG CGATGAGAAG ATGAGCGTTA TCGCTCTTGC AAATATTGAA
GAGGTTGAAA ATGATAAACT CTATCCTCCA AATGGAATAA GAACTCAGAG AGATGCCATA
GAATATTTAG AGAAGAGATT TGCAGCAGGC CAAGCTAAAG AGTACAGAGA AAAGAAAATA
TCTCAGATTT TGGATTCTTC CTTGCTTCCA CATCTGGGCA CGAGCAAGGA GGATAGGATA
AAGAAAGCTT ACTATTTGGG AAGAATGGCA AGAAGAGTTT TAGAACTGCA TTTAGGATTG
AGAAAGGAGG ACGATAAAGA CCATCTTGCA AATAAGAGAT TGAAGCTATC TGGGGATTTG
CTTGAGGAAT TATTCAGAAT GGCTTTTGAA GCCTTAATGA AGGACTTGAA ATATCAGCTG
GAGAGAACTT ACAACCGCAA GAAAGGAATA AGGATAAGAG TTTCCATAAG ACAGGATGTT
TTGACACAGA AGATAATGCA TGCCATGAGT ACAGGTAACT GGGTTGGGGG AAGAACAGGA
GTATCGCAAT TGTTGGATAG AACATCTCAT ATGAGCACAC TCAGCCATTT ACGCCGTGTG
ATCTCTCCTC TCACGCGCTC ACAGCCCCAT TTTGAAGCTA GAGATTTGCA TCCCACGCAG
TGGGGAAGGT TATGCCCAAA TGAAACACCA GAGGGTCAAA ATTGCGGATT AGTTAAGAAT
GCAGCCCTTA TAATTGATGT ATCTGAGGGT TATCCTGAGG AAGATGTCTT AAAGATTCTC
AAGGGTTTGG GAGTTGAAGA GAGGCAGTAT GAGACAGGAG AACTTGCAAG AGTGTATCTT
AATGGAAATC TGGTAGGTTA TCATAAGGAT GGTCTGGCTC TCACCAACGA GATAAGAAGC
AAGAGAAGAA AAGGATTAAT ATCGCACCAG ATAAATATAA GGTACGATGA TACGACCAAT
GAAGTTATGA TAAATTCCGA TAAAGGAAGA ATAAGGAGAC CTTTGCTTGT GGTTGAGAAC
GGAAATGTTA AGTACACGAG CAGGCACAGA GAGCTTCTTC GCAGGGGGAA GATGGAGATT
GAGGATTTAG TGAGAGAGGG AGTTGTTGAG TGGATAGATG CGGAGGAGGA AGAGAATGCA
TACATTGCCG TTTATGCCTA CGATGTTCCT GAAAGATGTC CCCATTGTGG AAGAGTACTT
GGCAGAAATG ATGTTGAATG GATGAATCCT GGAGAGGGAG AGAAAGTAAC CCTTAGGTGC
AAGCACTGCG GAGCAGAATT TGGTGTAGAA AAGAAGATAA CAAAGGAGCA TACTCATCTC
GAAATTGATC CACTGTTGAT TTTGGGCGCA GTTGCAGGAT GTGTGCCTTA TCCCCACCAC
AATTCTTCTC CAAGAATCAC CATGGGTGCA GCAATGCTCA AGCAATCATT GGGATTGCCA
GCCGCAAATT ATAGGCGTAG ACCGGATACT CGCGGACATC TATTGCATTA TCCACAGGCA
CCTATCGTCA GGACAAAAAC CATGGATTTT GTGAACTTTA TGCGTAGGCC TGCTGGACAA
AATGCAGTGG TTGCTATAAT TTCTTACCAT GGCTATAACA TTCAAGATGC AATCGTTATG
AACAAGGCTT CCGTGGAGAG AGGATTTGGA AGAAGCACAT TCTTTAGGAC TTATAAGAGT
GAGGAGCGCA GATATCCTGG TGGTCAGGAG GATAAGTTCG AAATTCCAAG TCCAGATGTT
CGCGGAGCAA TGACAGAAGA TAGGTACAAG CTCTTAGACG AAGATGGTTT GATCTCTCCC
GAAGTTTATG TAAAAGGTGG AGATGTGCTT ATAGGCAAGA CCTCACCCCC AAGATTCTTG
GAGGAAGAAA GTGAACTCTT AGGGCCGCAA AAGAGAAGAG AGAGCAGCGT GACAATGAGG
CCTGAAGAAG AGGGGTGGGT TGATTCTGTC TTGCTAACTG TGAGCGAAAA TAACTCTCGA
CTTGTAAAGG TGAAAGTTAG GGATCAGCGC ATTCCAGAAT TGGGGGATAA ATTTGCCTCA
AGACACGGGC AGAAAGGTGT TGTGGGAGCC ATAATACCTC AAGAGGATAT GCCCTTCACC
GAGAGTGGAA TCATACCGGA TTTGATAATT AATCCTCACG CAATTCCTTC AAGAATGACT
GTGGGGCACA TATTGGAGAT GATAGGTGGC AAGGTTGGCT CTCTTGAGGG AAGGTTTGTT
GATGGTACCG TGTTCAGTGG AGAGCCTGAA AAGGCATTGA GAGAAGCATT GGTTAAGAAT
GGATTCAAAT ACAATGGTAA GGAGATAATG TACGATGGCA TAACGGGAAG GAAGATAGAG
GCAGAGATAT TTGTTGGTGT AATATATTAC CAGAAACTGC ACCACATGGT CGCTGGAAAA
TTCCATGCGA GATCCCGTGG ACCTGTGCAG ATTCTTACAA GACAACCAAC TGAGGGACGC
AGCAGGCTCG GCGGTTTGAG GTTTGGAGAG ATGGAGAGAG ATACCCTAAT TGGTCATGGA
GCTGCAATGG TCATAAAGGA TAGATTGTTG GATAATTCAG ACGGCACTGT ACTCTATGTT
TGCGGAAATC CTGAGTGTGG CCATATTGCC ATGTTTGATA GAAAGCGCGG AATTCTCCGG
TGCCCAGTCT GCGGAAATAC CACGAACATA TACCCAATTG AAACCAGTTA TGCCTTCAAG
CTTATGCATG ATGAGCTTGC ATCACTTGGT GTTATTATGC GTATGAAGGT GGGTGATATG
AAATGA
 
Protein sequence
MNTIVDILFK KSVVNHHIAS YNDLIPTPDN PNSVMQEIVD TTKVTDEDPP GVITLDRTKT 
GGKTIKIVFG RNNDYWDVNE PTIRIGRPEI KEATGATVQI TPMEARLRDL SYLAPLYLKI
KVLECDDAGC YEREPEMVKI GDFPVMVKSK ICTLHEDNID DYLDSISKDK DILNWPYKQK
LEYVGEDPDD PGGYFIIGGS ERVLVSLEDL APNRVLVEKN ERYNTVVETA KVFSQRRGYR
ALTIMEKKSD GIIVVSVPAV AGTIPLVILM KALGLEKDQD IYRAIVSDEK MSVIALANIE
EVENDKLYPP NGIRTQRDAI EYLEKRFAAG QAKEYREKKI SQILDSSLLP HLGTSKEDRI
KKAYYLGRMA RRVLELHLGL RKEDDKDHLA NKRLKLSGDL LEELFRMAFE ALMKDLKYQL
ERTYNRKKGI RIRVSIRQDV LTQKIMHAMS TGNWVGGRTG VSQLLDRTSH MSTLSHLRRV
ISPLTRSQPH FEARDLHPTQ WGRLCPNETP EGQNCGLVKN AALIIDVSEG YPEEDVLKIL
KGLGVEERQY ETGELARVYL NGNLVGYHKD GLALTNEIRS KRRKGLISHQ INIRYDDTTN
EVMINSDKGR IRRPLLVVEN GNVKYTSRHR ELLRRGKMEI EDLVREGVVE WIDAEEEENA
YIAVYAYDVP ERCPHCGRVL GRNDVEWMNP GEGEKVTLRC KHCGAEFGVE KKITKEHTHL
EIDPLLILGA VAGCVPYPHH NSSPRITMGA AMLKQSLGLP AANYRRRPDT RGHLLHYPQA
PIVRTKTMDF VNFMRRPAGQ NAVVAIISYH GYNIQDAIVM NKASVERGFG RSTFFRTYKS
EERRYPGGQE DKFEIPSPDV RGAMTEDRYK LLDEDGLISP EVYVKGGDVL IGKTSPPRFL
EEESELLGPQ KRRESSVTMR PEEEGWVDSV LLTVSENNSR LVKVKVRDQR IPELGDKFAS
RHGQKGVVGA IIPQEDMPFT ESGIIPDLII NPHAIPSRMT VGHILEMIGG KVGSLEGRFV
DGTVFSGEPE KALREALVKN GFKYNGKEIM YDGITGRKIE AEIFVGVIYY QKLHHMVAGK
FHARSRGPVQ ILTRQPTEGR SRLGGLRFGE MERDTLIGHG AAMVIKDRLL DNSDGTVLYV
CGNPECGHIA MFDRKRGILR CPVCGNTTNI YPIETSYAFK LMHDELASLG VIMRMKVGDM
K