Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_1091 |
Symbol | |
ID | 8828049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | - |
Start bp | 1047786 |
End bp | 1051391 |
Gene Length | 3606 bp |
Protein Length | 1201 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | |
Product | DNA-directed RNA polymerase subunit B |
Protein accession | YP_003483462 |
Protein GI | 289596766 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00610767 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACCA TAGTGGATAT TTTGTTTAAG AAAAGTGTAG TGAATCACCA TATTGCGTCA TACAACGATT TGATACCCAC ACCAGATAAT CCAAATAGTG TGATGCAAGA GATTGTTGAT ACTACAAAGG TTACAGATGA GGACCCTCCG GGAGTTATAA CATTAGATAG AACAAAAACC GGTGGAAAGA CAATAAAAAT AGTTTTTGGA AGAAACAATG ACTACTGGGA TGTTAATGAG CCCACCATAA GGATAGGAAG GCCTGAGATT AAAGAAGCAA CGGGAGCAAC TGTTCAGATA ACGCCTATGG AAGCAAGGTT AAGGGATTTA AGTTACTTAG CTCCATTGTA TCTAAAGATA AAAGTTTTAG AATGTGATGA TGCAGGATGC TATGAAAGAG AGCCAGAAAT GGTTAAGATA GGAGATTTTC CTGTGATGGT AAAATCCAAG ATTTGCACCC TCCACGAGGA TAACATTGAC GATTATCTCG ATAGCATCTC AAAAGATAAG GATATACTCA ACTGGCCCTA CAAGCAGAAA TTGGAATATG TGGGCGAGGA CCCCGATGAC CCGGGTGGTT ATTTTATAAT TGGTGGAAGT GAGAGGGTTC TCGTATCTCT AGAGGACCTT GCTCCAAATA GGGTGTTAGT AGAGAAAAAC GAGAGATATA ACACTGTTGT GGAGACGGCC AAAGTATTCT CACAGCGTAG GGGTTATAGG GCCCTAACAA TTATGGAAAA GAAGAGCGAT GGTATTATTG TAGTTTCAGT TCCTGCGGTG GCTGGAACAA TACCTCTGGT AATTTTGATG AAGGCTCTTG GACTGGAGAA GGATCAAGAT ATCTACAGAG CGATTGTAAG CGATGAGAAG ATGAGCGTTA TCGCTCTTGC AAATATTGAA GAGGTTGAAA ATGATAAACT CTATCCTCCA AATGGAATAA GAACTCAGAG AGATGCCATA GAATATTTAG AGAAGAGATT TGCAGCAGGC CAAGCTAAAG AGTACAGAGA AAAGAAAATA TCTCAGATTT TGGATTCTTC CTTGCTTCCA CATCTGGGCA CGAGCAAGGA GGATAGGATA AAGAAAGCTT ACTATTTGGG AAGAATGGCA AGAAGAGTTT TAGAACTGCA TTTAGGATTG AGAAAGGAGG ACGATAAAGA CCATCTTGCA AATAAGAGAT TGAAGCTATC TGGGGATTTG CTTGAGGAAT TATTCAGAAT GGCTTTTGAA GCCTTAATGA AGGACTTGAA ATATCAGCTG GAGAGAACTT ACAACCGCAA GAAAGGAATA AGGATAAGAG TTTCCATAAG ACAGGATGTT TTGACACAGA AGATAATGCA TGCCATGAGT ACAGGTAACT GGGTTGGGGG AAGAACAGGA GTATCGCAAT TGTTGGATAG AACATCTCAT ATGAGCACAC TCAGCCATTT ACGCCGTGTG ATCTCTCCTC TCACGCGCTC ACAGCCCCAT TTTGAAGCTA GAGATTTGCA TCCCACGCAG TGGGGAAGGT TATGCCCAAA TGAAACACCA GAGGGTCAAA ATTGCGGATT AGTTAAGAAT GCAGCCCTTA TAATTGATGT ATCTGAGGGT TATCCTGAGG AAGATGTCTT AAAGATTCTC AAGGGTTTGG GAGTTGAAGA GAGGCAGTAT GAGACAGGAG AACTTGCAAG AGTGTATCTT AATGGAAATC TGGTAGGTTA TCATAAGGAT GGTCTGGCTC TCACCAACGA GATAAGAAGC AAGAGAAGAA AAGGATTAAT ATCGCACCAG ATAAATATAA GGTACGATGA TACGACCAAT GAAGTTATGA TAAATTCCGA TAAAGGAAGA ATAAGGAGAC CTTTGCTTGT GGTTGAGAAC GGAAATGTTA AGTACACGAG CAGGCACAGA GAGCTTCTTC GCAGGGGGAA GATGGAGATT GAGGATTTAG TGAGAGAGGG AGTTGTTGAG TGGATAGATG CGGAGGAGGA AGAGAATGCA TACATTGCCG TTTATGCCTA CGATGTTCCT GAAAGATGTC CCCATTGTGG AAGAGTACTT GGCAGAAATG ATGTTGAATG GATGAATCCT GGAGAGGGAG AGAAAGTAAC CCTTAGGTGC AAGCACTGCG GAGCAGAATT TGGTGTAGAA AAGAAGATAA CAAAGGAGCA TACTCATCTC GAAATTGATC CACTGTTGAT TTTGGGCGCA GTTGCAGGAT GTGTGCCTTA TCCCCACCAC AATTCTTCTC CAAGAATCAC CATGGGTGCA GCAATGCTCA AGCAATCATT GGGATTGCCA GCCGCAAATT ATAGGCGTAG ACCGGATACT CGCGGACATC TATTGCATTA TCCACAGGCA CCTATCGTCA GGACAAAAAC CATGGATTTT GTGAACTTTA TGCGTAGGCC TGCTGGACAA AATGCAGTGG TTGCTATAAT TTCTTACCAT GGCTATAACA TTCAAGATGC AATCGTTATG AACAAGGCTT CCGTGGAGAG AGGATTTGGA AGAAGCACAT TCTTTAGGAC TTATAAGAGT GAGGAGCGCA GATATCCTGG TGGTCAGGAG GATAAGTTCG AAATTCCAAG TCCAGATGTT CGCGGAGCAA TGACAGAAGA TAGGTACAAG CTCTTAGACG AAGATGGTTT GATCTCTCCC GAAGTTTATG TAAAAGGTGG AGATGTGCTT ATAGGCAAGA CCTCACCCCC AAGATTCTTG GAGGAAGAAA GTGAACTCTT AGGGCCGCAA AAGAGAAGAG AGAGCAGCGT GACAATGAGG CCTGAAGAAG AGGGGTGGGT TGATTCTGTC TTGCTAACTG TGAGCGAAAA TAACTCTCGA CTTGTAAAGG TGAAAGTTAG GGATCAGCGC ATTCCAGAAT TGGGGGATAA ATTTGCCTCA AGACACGGGC AGAAAGGTGT TGTGGGAGCC ATAATACCTC AAGAGGATAT GCCCTTCACC GAGAGTGGAA TCATACCGGA TTTGATAATT AATCCTCACG CAATTCCTTC AAGAATGACT GTGGGGCACA TATTGGAGAT GATAGGTGGC AAGGTTGGCT CTCTTGAGGG AAGGTTTGTT GATGGTACCG TGTTCAGTGG AGAGCCTGAA AAGGCATTGA GAGAAGCATT GGTTAAGAAT GGATTCAAAT ACAATGGTAA GGAGATAATG TACGATGGCA TAACGGGAAG GAAGATAGAG GCAGAGATAT TTGTTGGTGT AATATATTAC CAGAAACTGC ACCACATGGT CGCTGGAAAA TTCCATGCGA GATCCCGTGG ACCTGTGCAG ATTCTTACAA GACAACCAAC TGAGGGACGC AGCAGGCTCG GCGGTTTGAG GTTTGGAGAG ATGGAGAGAG ATACCCTAAT TGGTCATGGA GCTGCAATGG TCATAAAGGA TAGATTGTTG GATAATTCAG ACGGCACTGT ACTCTATGTT TGCGGAAATC CTGAGTGTGG CCATATTGCC ATGTTTGATA GAAAGCGCGG AATTCTCCGG TGCCCAGTCT GCGGAAATAC CACGAACATA TACCCAATTG AAACCAGTTA TGCCTTCAAG CTTATGCATG ATGAGCTTGC ATCACTTGGT GTTATTATGC GTATGAAGGT GGGTGATATG AAATGA
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Protein sequence | MNTIVDILFK KSVVNHHIAS YNDLIPTPDN PNSVMQEIVD TTKVTDEDPP GVITLDRTKT GGKTIKIVFG RNNDYWDVNE PTIRIGRPEI KEATGATVQI TPMEARLRDL SYLAPLYLKI KVLECDDAGC YEREPEMVKI GDFPVMVKSK ICTLHEDNID DYLDSISKDK DILNWPYKQK LEYVGEDPDD PGGYFIIGGS ERVLVSLEDL APNRVLVEKN ERYNTVVETA KVFSQRRGYR ALTIMEKKSD GIIVVSVPAV AGTIPLVILM KALGLEKDQD IYRAIVSDEK MSVIALANIE EVENDKLYPP NGIRTQRDAI EYLEKRFAAG QAKEYREKKI SQILDSSLLP HLGTSKEDRI KKAYYLGRMA RRVLELHLGL RKEDDKDHLA NKRLKLSGDL LEELFRMAFE ALMKDLKYQL ERTYNRKKGI RIRVSIRQDV LTQKIMHAMS TGNWVGGRTG VSQLLDRTSH MSTLSHLRRV ISPLTRSQPH FEARDLHPTQ WGRLCPNETP EGQNCGLVKN AALIIDVSEG YPEEDVLKIL KGLGVEERQY ETGELARVYL NGNLVGYHKD GLALTNEIRS KRRKGLISHQ INIRYDDTTN EVMINSDKGR IRRPLLVVEN GNVKYTSRHR ELLRRGKMEI EDLVREGVVE WIDAEEEENA YIAVYAYDVP ERCPHCGRVL GRNDVEWMNP GEGEKVTLRC KHCGAEFGVE KKITKEHTHL EIDPLLILGA VAGCVPYPHH NSSPRITMGA AMLKQSLGLP AANYRRRPDT RGHLLHYPQA PIVRTKTMDF VNFMRRPAGQ NAVVAIISYH GYNIQDAIVM NKASVERGFG RSTFFRTYKS EERRYPGGQE DKFEIPSPDV RGAMTEDRYK LLDEDGLISP EVYVKGGDVL IGKTSPPRFL EEESELLGPQ KRRESSVTMR PEEEGWVDSV LLTVSENNSR LVKVKVRDQR IPELGDKFAS RHGQKGVVGA IIPQEDMPFT ESGIIPDLII NPHAIPSRMT VGHILEMIGG KVGSLEGRFV DGTVFSGEPE KALREALVKN GFKYNGKEIM YDGITGRKIE AEIFVGVIYY QKLHHMVAGK FHARSRGPVQ ILTRQPTEGR SRLGGLRFGE MERDTLIGHG AAMVIKDRLL DNSDGTVLYV CGNPECGHIA MFDRKRGILR CPVCGNTTNI YPIETSYAFK LMHDELASLG VIMRMKVGDM K
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