Gene Aboo_1080 details

Gene Information

• Locus tag: Aboo_1080
• ID: 8828038
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 1036133
• End bp: 1036864
• Gene Length: 732 bp
• Protein Length: 243 aa
• Translation table: 11
• GC content: 35%
• Product: HAD-superfamily hydrolase, subfamily IA, variant 1
• Protein accession: YP_003483451
• Protein GI: 289596755

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGAATA TAAAATTTAT GGCAAAGGTT AAAACGATGG TGCATATCTC CATAAATATG 
GATGTGTTTC TGGATATGAC CGGTACCATA ACCGATATGG AGAGCGAGAA CATGGCCTTT 
TTAAAAATGT GCGAGGCCAT AGGTAAAAGA TTCAATATAC AAATGGATGG AAAAAAAATT 
ATGGAGCACA TTTTGAGATA CAGAAAGCCG TTTATGGAGA ATAGACATAA AGAGTACTAT 
CCTATAAGAA ACCTCATAGC AAAGGCTATA GAAGAGATTG TACCTAAAAG ATTATGCTCC 
TCAGATGTTT TTTGGATTAT AGATTCTTAC TCATACTATC ATGCAAGATA TGTAAAGCTT 
GGACCTGGTG CTTTAGAAGC ATTAAAAGAG ATTAGAAACA TATCGGAACA TATGGGGCTA 
ATAACAGATG CCGATACCCC TTATACCAAT AAAGTGTTGG AAGCTTTAGG AATAAAACAT 
TTTTTTGATT CTATCACAAC GGCAGAGGAT GCTGGAGTTG GCAAACCAAA CCCGAAGATT 
TTCAAAATGG CTTTAAGACA TTCTAAGAGC AATCCTAAGG TATACATAGG AGATTCAGAG 
TTTAGAGATG TGAAAGGGGC TAAAGATGTG GGAATGATTG CAATAAAAAT AGGAAATAAT 
AGTACAGAGG CAGATTATAC AGTTCCAAGT TTAAAAGACG CTATAAAAAT ATTAAAAACT 
CTTATTCGGT AA 

 

Protein sequence

MVNIKFMAKV KTMVHISINM DVFLDMTGTI TDMESENMAF LKMCEAIGKR FNIQMDGKKI 
MEHILRYRKP FMENRHKEYY PIRNLIAKAI EEIVPKRLCS SDVFWIIDSY SYYHARYVKL 
GPGALEALKE IRNISEHMGL ITDADTPYTN KVLEALGIKH FFDSITTAED AGVGKPNPKI 
FKMALRHSKS NPKVYIGDSE FRDVKGAKDV GMIAIKIGNN STEADYTVPS LKDAIKILKT 
LIR