Gene Aboo_1077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1077 
Symbol 
ID8828035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1033998 
End bp1035218 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content40% 
IMG OID 
Productpeptide chain release factor 1 
Protein accessionYP_003483448 
Protein GI289596752 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACGG AGGAAGCAAG GAAAAACTAT GAATTTCGGC GTTACTTAGA AGAATTGGAG 
AAGTACGAGG GTAGAGGTAC AGAGCTCATC TCAGTTTATA TACCCCCCAA GAGACCCATA
TCTGATGTAA TCGCCTATTT GAGAGACGAG TATGGAACAT CTGCAAATAT CAAAAGCAAG
ACCACGAGAA AGAATGTTAT GAGTGCCATT GAAAGCATCA TGTCCCGTTT AAAGTATTTC
AAAATGCCTC CTCCCAATGG ATTAGTAGTG TTCGTAGGGC ATGTTATAAA AAGAGGTGAC
CAGACTGAGA TGGTCTCTTA TGTGTTAGAG CCACCAGAGC CGGTGCAATC TTTCATATAC
AAATGTGATT CTAAATTCTA TCTAGAGCCT TTAAAAGCCA TGCTTGGTGA GAAGGATATC
TATGGTTTAC TTGTTATAGA CAGAAAAGAG GCCACAATCG GATTTTTAAA AGGAACGAGA
ATTGAGGTAG TTAAGCATCT TGACAGCATG GTTCCAAGCA AGCATCATCA AGGTGGGCAA
TCATCGCGAA GGTTTGAAAG GTTGATTGAG CTAGCTGTCC ACGAGTTTTT CAAGAAAGTT
GGAGATAAAG CTAACGAGGT GTTTCTTGCA GAGGAAAAAT TAAAAGGCAT ATTGGTAGGA
GGCCCTGGAG GAACGAAAGA TTCATTTCTC AAAGGAGATT ACTTACACCA CGAATTAAAG
AAGAAAATAA TAGAGGTGTT CGATGTAGGC TATACTGATG AATATGGGCT ACACGAGCTT
GTAGAAAAGG CTTCCACCAC ATTAAAAAAT TTAGAGGTGT TTAAAGAGAG ACAACTGCTA
GGGAGGTTTT TCAGGGAAAT TAGAAAGCCA GATGGAGGCT TAGCAGTTTA TGGGGAGAAG
GAAGTACGAG AGGCATTGGA GCGTGGGGCT GTAGATGTTC TTCTCATCTC TGATAGTCTA
AGAAAATACA GGATCACTTG GAGATGTCCG CAGTGCGGTA AAGAGGTGAA AGAAACTATA
AAAGGCGAGA TTCCTGAGAA AATATGTCCC GATTGTGGAA TACCTATGGA TATAGTGGAA
AAGAAAGATT TAATTGAGGA ATATTACGAT ATTGCAGAGC AATTTAATAC TCAAGTAGAG
CTAATATCAA ATGAAAGCGA AGAGGGAAAA ATATTTGCAA AGGCGTTTGG AGGTATCGCT
GCAATTCTTC GCTATAAGTA A
 
Protein sequence
MDTEEARKNY EFRRYLEELE KYEGRGTELI SVYIPPKRPI SDVIAYLRDE YGTSANIKSK 
TTRKNVMSAI ESIMSRLKYF KMPPPNGLVV FVGHVIKRGD QTEMVSYVLE PPEPVQSFIY
KCDSKFYLEP LKAMLGEKDI YGLLVIDRKE ATIGFLKGTR IEVVKHLDSM VPSKHHQGGQ
SSRRFERLIE LAVHEFFKKV GDKANEVFLA EEKLKGILVG GPGGTKDSFL KGDYLHHELK
KKIIEVFDVG YTDEYGLHEL VEKASTTLKN LEVFKERQLL GRFFREIRKP DGGLAVYGEK
EVREALERGA VDVLLISDSL RKYRITWRCP QCGKEVKETI KGEIPEKICP DCGIPMDIVE
KKDLIEEYYD IAEQFNTQVE LISNESEEGK IFAKAFGGIA AILRYK