Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_1077 |
Symbol | |
ID | 8828035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | - |
Start bp | 1033998 |
End bp | 1035218 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | |
Product | peptide chain release factor 1 |
Protein accession | YP_003483448 |
Protein GI | 289596752 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATACGG AGGAAGCAAG GAAAAACTAT GAATTTCGGC GTTACTTAGA AGAATTGGAG AAGTACGAGG GTAGAGGTAC AGAGCTCATC TCAGTTTATA TACCCCCCAA GAGACCCATA TCTGATGTAA TCGCCTATTT GAGAGACGAG TATGGAACAT CTGCAAATAT CAAAAGCAAG ACCACGAGAA AGAATGTTAT GAGTGCCATT GAAAGCATCA TGTCCCGTTT AAAGTATTTC AAAATGCCTC CTCCCAATGG ATTAGTAGTG TTCGTAGGGC ATGTTATAAA AAGAGGTGAC CAGACTGAGA TGGTCTCTTA TGTGTTAGAG CCACCAGAGC CGGTGCAATC TTTCATATAC AAATGTGATT CTAAATTCTA TCTAGAGCCT TTAAAAGCCA TGCTTGGTGA GAAGGATATC TATGGTTTAC TTGTTATAGA CAGAAAAGAG GCCACAATCG GATTTTTAAA AGGAACGAGA ATTGAGGTAG TTAAGCATCT TGACAGCATG GTTCCAAGCA AGCATCATCA AGGTGGGCAA TCATCGCGAA GGTTTGAAAG GTTGATTGAG CTAGCTGTCC ACGAGTTTTT CAAGAAAGTT GGAGATAAAG CTAACGAGGT GTTTCTTGCA GAGGAAAAAT TAAAAGGCAT ATTGGTAGGA GGCCCTGGAG GAACGAAAGA TTCATTTCTC AAAGGAGATT ACTTACACCA CGAATTAAAG AAGAAAATAA TAGAGGTGTT CGATGTAGGC TATACTGATG AATATGGGCT ACACGAGCTT GTAGAAAAGG CTTCCACCAC ATTAAAAAAT TTAGAGGTGT TTAAAGAGAG ACAACTGCTA GGGAGGTTTT TCAGGGAAAT TAGAAAGCCA GATGGAGGCT TAGCAGTTTA TGGGGAGAAG GAAGTACGAG AGGCATTGGA GCGTGGGGCT GTAGATGTTC TTCTCATCTC TGATAGTCTA AGAAAATACA GGATCACTTG GAGATGTCCG CAGTGCGGTA AAGAGGTGAA AGAAACTATA AAAGGCGAGA TTCCTGAGAA AATATGTCCC GATTGTGGAA TACCTATGGA TATAGTGGAA AAGAAAGATT TAATTGAGGA ATATTACGAT ATTGCAGAGC AATTTAATAC TCAAGTAGAG CTAATATCAA ATGAAAGCGA AGAGGGAAAA ATATTTGCAA AGGCGTTTGG AGGTATCGCT GCAATTCTTC GCTATAAGTA A
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Protein sequence | MDTEEARKNY EFRRYLEELE KYEGRGTELI SVYIPPKRPI SDVIAYLRDE YGTSANIKSK TTRKNVMSAI ESIMSRLKYF KMPPPNGLVV FVGHVIKRGD QTEMVSYVLE PPEPVQSFIY KCDSKFYLEP LKAMLGEKDI YGLLVIDRKE ATIGFLKGTR IEVVKHLDSM VPSKHHQGGQ SSRRFERLIE LAVHEFFKKV GDKANEVFLA EEKLKGILVG GPGGTKDSFL KGDYLHHELK KKIIEVFDVG YTDEYGLHEL VEKASTTLKN LEVFKERQLL GRFFREIRKP DGGLAVYGEK EVREALERGA VDVLLISDSL RKYRITWRCP QCGKEVKETI KGEIPEKICP DCGIPMDIVE KKDLIEEYYD IAEQFNTQVE LISNESEEGK IFAKAFGGIA AILRYK
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