Gene Aboo_1073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1073 
Symbol 
ID8828031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand- 
Start bp1030070 
End bp1030738 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content41% 
IMG OID 
Productphosphodiesterase, MJ0936 family 
Protein accessionYP_003483444 
Protein GI289596748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.063747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGCTA TCATATCAGA CATACACGGG AATCTTCCCG CCTTGAAAGT TGTACTTGAG 
AGAATCGAAG ACGCAGATAT AATTTTATGT GCGGGGGACC TTGTGGGATA CAATCCCTGG 
CCCAATGAAG TGATATGGGA AATAAGAAAA AGAAAAATTC CTTGCATCAG GGGAAATCAT 
GATAGAGCGG TCATTTATGA TAGTTACTTT AGATTCAATC CGTACGCTGC AACTGCGGCT 
TCCTGGACTA GGAATAAATT GACAAAAGAG AATATGGAAT ATCTCTACTC CCTTAAAGAC 
CATCTAATTT TAGATATCGA AGGCAAAAGA ATTGCATTGC ATCATGGTGC TCCTTTTGAT 
GAGGACCGTT ATATCTATCC CGATGAAGCC ACTGGGGAGC TTTTGGAGTA TGATAACGCT 
GATCTTCTGA TTTTAGGACA TACCCATGTA CCCTTTGTAA ATGTTTTTGA GAGGGGAGTA 
ATAATCAATC CGGGAAGTGT TGGGCAGCCA AGAGATGGAG ATCCCCGTGC CTCCTATGCC 
CTTGTGGATT TGAAAAATAA AAAATACGAG ATAAAGAGAG TTGAATATCC AATAGATGAA 
GTCTACAACA AAATTATAGA AGAGGGTTTG CCTACGTTCT TGGGCGAGAG ATTGTACATT 
GGCTACTAG
 
Protein sequence
MLAIISDIHG NLPALKVVLE RIEDADIILC AGDLVGYNPW PNEVIWEIRK RKIPCIRGNH 
DRAVIYDSYF RFNPYAATAA SWTRNKLTKE NMEYLYSLKD HLILDIEGKR IALHHGAPFD 
EDRYIYPDEA TGELLEYDNA DLLILGHTHV PFVNVFERGV IINPGSVGQP RDGDPRASYA 
LVDLKNKKYE IKRVEYPIDE VYNKIIEEGL PTFLGERLYI GY