| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_1056 |
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| Symbol | |
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| ID | 8828013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aciduliprofundum boonei T469 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013926 |
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| Strand | - |
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| Start bp | 1014731 |
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| End bp | 1016431 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | |
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| Product | Type IV secretory pathway VirB4 protein-like protein |
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| Protein accession | YP_003483427 |
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| Protein GI | 289596731 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000236301 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAATTA AGAAGGACAT AATCTTTGAC AAGGAAAAGA TGAGGTTGAG ATTGCAGCCA
ATCAACTTAA AGAATGTTCT AAAACCAAAG ATAGAGATTT ACAAGAACCA CATAGAAGCG
AAAATCAAGA GGTTATACAT CTTCCCACTT CTCCCGAAAG AATACCCCAC GATGTTAGAA
TATGGCTATT TGAGGAACTT GCTCTCCTCA TACATGAATG TGGATATAAG CTTACATCTG
GACAGGTTGA AGGATGAGAA GGCAATTGCT CTCATACACA CGGATTTGAC GAACATAAAG
GCAGAATTAC TAACAACGGG AGAAACATCG CCAAAGTATT CTAAACTCAA ATTAGAGTAT
GATTCCTTAT CGAAGTTAAA GGATTTAATC TCCGCAAGGA AAACCCACGC ATACTTTCTA
ACCCTCAGTA TCGCGGTAAA GGGAAGAACC TACAAGGAAG CGGAGGAAAC TCTGGGGAAA
ATAGAAAGTG CATTACAAGC CATGAATTTC AAGTTAATCA AGGGCTATTA CAGGGTTTGG
GCTATATTCA AATCCACGCT ACCCATGATG GACAGGAACA TCCCATACTA CAAGGGAAGG
TTCGTTCATA CCGATGTCAT AACTGCCTCA TTTCCTTTCA TTTCCGAGTT TGCGGGAGTG
TTAGGAGAGG ACATGATACT CTACGGGATA AACGACATAA ACAGCACACC CGTTTTCGTG
GATCGATTTT ATTTACCCTC ACAAAACATG CTCATTTTCG GTAAGACAGG TTCGGGTAAA
TCTTACTTTG AGAAACTCAC GATTTTGAGG GCTTACAATG TCAATCCTGA TGTGATGATT
TACGCCATAG ACCCTTTGAG CGAGAACGCT GGGACATTCA AAGCTCTGGG AGGAATAAAC
ATAAATCTCT GGCAGGGAAA ACATGTGATA AACCCTCTGG AATTGAGAGG AGAGGAAGTG
GCAAACAAGG TGAGAAGTGT AATTGCGATG TTAGAAACTC TTTTCCAGAT GAACGGGGAG
GAGATGGCTC TCTTGGATGT AATCCTGAAC CAGCTTTACA GGGAGAACGA ACATCCGATA
ATGGAAGATT TGATAGAGCG TTGTGCCAAG GAGGAGAAGT TAAAGAGAGT ATCTATGGTT
CTGGAGATAT TCAAGAAAGG TTCTCTCGCT TTCCTCAATA GAAAAACGAA TTTCAAGATG
GAGAAGGACA TAGTTAATTT TGACTTGGGA GATGTCCCAG ATAATCTTCT CGCATTCTTC
ATGACTATGA TTATTGACTA CATATACGCA CACATAAAGA TGAAGAAGTA TGAGGACAGG
AAGAAATTGG TATATGTGGA TGAGGTTCAT CATCTCTGGA GCCACGAAAG AGCTGCGGAG
ATGTTGAGTT GGATGGCAAG GCACACAAGG CACTTTCAAA CGGGATTAAC CCTCTTAACG
CAATCGGCAA ACGATGCCTT CTTGAACAAA TACACAAGGG CCATAATGGA AAACACCGAA
ATGCACCTTC TCCTTTATCA CGATTACATA TCCGAAGATG TGAGAAAGTT CTACAAGTTC
GTTCCCCAAG AGGAGAGATA CATAACCATA AGGCATAATG CGAAAGAGGC GGGATACTCC
GTTGGGCTGT TGAGATTGGG AGTGGTGAAA GTTCCCATAC GCATATACGC TTCGGAAGAA
GAAGATAAAT TCATTGCTTG A
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| Protein sequence | MVIKKDIIFD KEKMRLRLQP INLKNVLKPK IEIYKNHIEA KIKRLYIFPL LPKEYPTMLE
YGYLRNLLSS YMNVDISLHL DRLKDEKAIA LIHTDLTNIK AELLTTGETS PKYSKLKLEY
DSLSKLKDLI SARKTHAYFL TLSIAVKGRT YKEAEETLGK IESALQAMNF KLIKGYYRVW
AIFKSTLPMM DRNIPYYKGR FVHTDVITAS FPFISEFAGV LGEDMILYGI NDINSTPVFV
DRFYLPSQNM LIFGKTGSGK SYFEKLTILR AYNVNPDVMI YAIDPLSENA GTFKALGGIN
INLWQGKHVI NPLELRGEEV ANKVRSVIAM LETLFQMNGE EMALLDVILN QLYRENEHPI
MEDLIERCAK EEKLKRVSMV LEIFKKGSLA FLNRKTNFKM EKDIVNFDLG DVPDNLLAFF
MTMIIDYIYA HIKMKKYEDR KKLVYVDEVH HLWSHERAAE MLSWMARHTR HFQTGLTLLT
QSANDAFLNK YTRAIMENTE MHLLLYHDYI SEDVRKFYKF VPQEERYITI RHNAKEAGYS
VGLLRLGVVK VPIRIYASEE EDKFIA
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