Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_1050 |
Symbol | |
ID | 8828007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | + |
Start bp | 1008930 |
End bp | 1009484 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003483421 |
Protein GI | 289596725 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000000995235 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACCAT CTTTGAGTAG CATAAAGGAG CGAAGAAGAA GGCTGGGGTG GAGTCAAAAA GAGCTGGCAA AAAGGAGTGG AGTGTCACAA TCAGCAATAA CGAAGATAGA GAAGGGTGAC ATGAACCCAT CTTACACGCT AGCGGTGAAG ATTTTCAATG CCCTGGATGA AGGAGAGCGA GAGAAGTACA AGGGAAAGAA AGCAAAGGAT TTGATGAACA CTACTGTGAT ATCTTTATCT CCCAAGGATA GAGTGAAAAA AGCAAGAGAG TTGATGAAAG AGCACGGGAT AAGTCAGATA CCGGTGGTGG AGAGAGATAA GGTTGTGGGG ATGATCACGG AGAATGATAT TCTGGAGGGA TACGAAAAGC ACGGAGCTGG GATAGTTGAT CTCTTGGTTG AGGATGTTAT GGGTCCTCCG CCAATTGCAG TGAGAAAAGA TACGAGCATG GATGCCATTG TTGAGCTTTT GAAGCAGGAG CAGGCGTTGC TCGTCGTGGA GAATGATGAG CTCTTGGGAA TAATCACCAA AGCAGACATA GTTTACAAGG GATGA
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Protein sequence | MIPSLSSIKE RRRRLGWSQK ELAKRSGVSQ SAITKIEKGD MNPSYTLAVK IFNALDEGER EKYKGKKAKD LMNTTVISLS PKDRVKKARE LMKEHGISQI PVVERDKVVG MITENDILEG YEKHGAGIVD LLVEDVMGPP PIAVRKDTSM DAIVELLKQE QALLVVENDE LLGIITKADI VYKG
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