Gene Aboo_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1020 
Symbol 
ID8827977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp979781 
End bp980266 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content42% 
IMG OID 
ProductCRISPR-associated protein Cas4 
Protein accessionYP_003483391 
Protein GI289596695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0000334057 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTTA CAGGAAGCTT GGTTCATGAG TATGTTGTGT GCAAGAGGGC CGCTTGGTAC 
TCTTACAGAG GAGTGAGATT GGAAAATGAG TACATTATCT TAGGAAAGAT GCTTCACGAA
AAGAGTTACA AGGGAGAGAT AAAGAATCTG TTTGGTGAGG GTGTATCCAT AGATTTCACG
AGGAAGGAGA ACGGGGAAGT ATGGATATAC GAGGTTAAGA GAAGTTCCAA GATGCTCAAC
GCAGCCAGAA TGCAGTTATT GTTTTATTTA AAATGGCTGA AGGATAGGGG AGTGGAAGTT
AAAGGCAAGA TTGCAGTTCC TGAGGAGAAG TACACGGAAA TGGTTGAGTT GAATGAAGAA
AATGAGAAGA AGATTGAAGA TTTGCTTAAA GAGATGGAGG TTGAGATAGG CAAAGAAAGG
CCTCCAAAAC CAGTTTGGCG GAAGATATGT GAAAAATGCT CGTATTTAGA GCTTTGCTGG
GCGTGA
 
Protein sequence
MEFTGSLVHE YVVCKRAAWY SYRGVRLENE YIILGKMLHE KSYKGEIKNL FGEGVSIDFT 
RKENGEVWIY EVKRSSKMLN AARMQLLFYL KWLKDRGVEV KGKIAVPEEK YTEMVELNEE
NEKKIEDLLK EMEVEIGKER PPKPVWRKIC EKCSYLELCW A