| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_1016 |
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| Symbol | |
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| ID | 8827973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aciduliprofundum boonei T469 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013926 |
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| Strand | + |
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| Start bp | 974668 |
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| End bp | 976476 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | |
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| Product | Type IV secretory pathway VirD4 protein-like protein |
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| Protein accession | YP_003483387 |
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| Protein GI | 289596691 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00046304 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAGAA CTGCATTGAG CCCAGAGAGC ATACACGAAG CAGAGCAGAG AAGGAAGGAA
AGAGAGGAAA AGAGGTTAAT TCTCTTTGTA GTCATAGGTT TATTGTTCTT CTTTCCACCC
CTGTTCCTGC TCCCCTACAT AATAGATTTC CTGCGTAGGA AAGATTACTC AAAAATACCC
GTAAAGAGAG TTTTTGATAA AAGAAGATTG TGGAGTTTTT CCTTCCTGCT CACTTCTTAC
TCTCTTTCTT ACTTTCTTAT CTTTCCTTTC TATGCGAGTT TGAAAAGGAA CATACTCCCC
TTCTGGAAAC CATTTTTTTC ATACCCGTTC TCCGAGTTTT TGGTGTATCC TCACTTCTCC
CTTTACTCTA ATCTTTACCT GTTCATCCTA TACGGGTTGA TAGTGCCGAT AGTCATAAGC
ATTCCCCTTG CGGTAGTGTT GAAAAAGAAA TACAGGTTGA GGATACCACC AGATAGTTTA
GTAATCCCCA CCAAGCAAGG AAACATCGTG ATAGAGAAGT ATAACACGGG AATTATGGTT
GTGGGTGCTC CCGGTTCTGG TAAAACGGAA TTGATTAAAC AAGTAATCTA TCAATTCCCG
CAAAAGAGAG ATTATGTTTG GGTAATTTTC GATCCCAAGG GAGATTATTA CGAAGCGTTT
GGAACGGAAA GAGACATAAC TTTGAGCGTG AATGGTTCTT CTTATGCGTG GAACATATTT
TGGGAGATAG ACCCCGATAG AGCTACAACG GATGTTATAG AAATAGCCAA AGAGATATTT
CCAATTGAAG AAAGAGGAGG AGAGGATAAG TTTTGGGTAG TGACTTCCCA GCAACTCTTA
TCTGCCTTCA TACTCACATT TTACAGACAG GCATTACAGA CATACACGAA GTATTTCTCT
GGTAAAGTGG ATAGGGAGAG ATTAAAAGAG TTCCTGCCCA CGAACGAGGA TTTCATGGAT
TTCATAAACC AGCTCACCAT AGAACAAGCG TATAACCTCT TAGTCAATCA GGAAGATTTG
AGGAGCGTTG CCGAATACAT CAATCCACAA GCGATGAAAC AGGCAAGTGG TGTGTGGAGC
AATTTCTATT CCCGCATAAA TGAGATATTC ATAGGAGATT TCTACAAGAC GGCAGGAAAG
AGACAGATGA GCATAAGGGA TTACATAGAA AATCCACAGG GTAGAAAGTT GTTCATAGAG
TATAATGTGG AAACGGGAGA AGCCGTTGCA CCGATATTTA GATTGCTGGT TGATAGAGCG
ATAAAGTATT CCTTTGCCAG AGAAAATCAG TATAATAGGA TAGGAGAGCC AAGAAAGAAA
TACTTTGTTA TAGATGAGTT CCAATTGATA CCCAAGTTGA AAAGGTATCA GGAATTGGTG
AATTTTGGAC GCTCTTACTA CATAACCTCA ATCATAGGAA TACAGAGCAT AGCACAGGTG
ATAGAGAAAT ACGGGAAGGA TTCCGCAAAT GCGGTAGTTG CCGGACACGC CTATTTGTTT
GCCCTCCGTG CCTACGATAG TGCCTCCTCT CAATTGATAC GCTCAAGGAT TGGAAAGAAA
CAGGTATGGC AGAGAGAACC CCAGCACATA CAGGTTCAAG GCAGAGGAGT TTATGTTGCC
GATAAGTATT CCACAACGGA GTATTTCCCG ATTAGTGAGG AGCATTTGAG AACCATGCCC
GTTGGACAAT GTATAATCGT CACTCCCGAC GGATTTAGAG AAGTCAATCT CTACACTTTC
CAGCAGGGTA AAAGGATAAT TGCGGAATTG TTGAAAATGT ATAATCTTGG TTATTCTTCT
CTCCTTTGA
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| Protein sequence | MQRTALSPES IHEAEQRRKE REEKRLILFV VIGLLFFFPP LFLLPYIIDF LRRKDYSKIP
VKRVFDKRRL WSFSFLLTSY SLSYFLIFPF YASLKRNILP FWKPFFSYPF SEFLVYPHFS
LYSNLYLFIL YGLIVPIVIS IPLAVVLKKK YRLRIPPDSL VIPTKQGNIV IEKYNTGIMV
VGAPGSGKTE LIKQVIYQFP QKRDYVWVIF DPKGDYYEAF GTERDITLSV NGSSYAWNIF
WEIDPDRATT DVIEIAKEIF PIEERGGEDK FWVVTSQQLL SAFILTFYRQ ALQTYTKYFS
GKVDRERLKE FLPTNEDFMD FINQLTIEQA YNLLVNQEDL RSVAEYINPQ AMKQASGVWS
NFYSRINEIF IGDFYKTAGK RQMSIRDYIE NPQGRKLFIE YNVETGEAVA PIFRLLVDRA
IKYSFARENQ YNRIGEPRKK YFVIDEFQLI PKLKRYQELV NFGRSYYITS IIGIQSIAQV
IEKYGKDSAN AVVAGHAYLF ALRAYDSASS QLIRSRIGKK QVWQREPQHI QVQGRGVYVA
DKYSTTEYFP ISEEHLRTMP VGQCIIVTPD GFREVNLYTF QQGKRIIAEL LKMYNLGYSS
LL
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