Gene Aboo_1013 details

Gene Information

• Locus tag: Aboo_1013
• ID: 8827970
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 972531
• End bp: 973193
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 43%
• Product: hypothetical protein
• Protein accession: YP_003483384
• Protein GI: 289596688

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0000000000858271
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTAAGG AATTAGATGA GAAGGATGCG GATGCGTTTC TCGGTGCAGG CTGGGAAGAT 
GTGAGATACA AGGTGCCAAA AGGCAAATTT AGAGTTGCTC TGATAGATAT GTTTGACTAC 
ACTACCACTA TAATTGGAGA TTTTGATGAT GAAAGCTCTG CAAAAAAGTA TGTGCTTGAT 
AATGAAGATT TGCTTGGGGG TTACGAAAGC TTGGTTATCT ACAATGATGA GGGCAAGCTC 
GTGTACGATT CTGATTGGAG AGAGGAGAAA GTAGATGATG AAACTTTGAA TAAATTCATA 
AAAATGGTGC GTGATGAACT TGGTAGCAAG GGATATGAAG AGTATGTCAA ATCCTCATTG 
TTGATATCGG ATAAGAGCGT GAAATCCATG GATGATATAA CCAAAACGGC ACTTGAGGTG 
GATGGCACCG TCCAAGACAA GCTCAAAAAC CTGTTTTTCA TCCAAGCTTT TATGGGGTTG 
GTGAATGTGG AGCTTGGAGC TTTCATAAAA TCGGCAGGAA TGGAGATAGA GGCAGGCGGG 
TTCAAGGATC CAAAGGAGGT ATACGAGCAC ATAGGAGATG TGGACGAGCT CACGGATGAT 
GTGATATCCC TCGTATCCCT CGCTGGGCTC AAGTTCGGAT ACGACTTCAA GCATGGCAAC 
TGA 

 

Protein sequence

MGKELDEKDA DAFLGAGWED VRYKVPKGKF RVALIDMFDY TTTIIGDFDD ESSAKKYVLD 
NEDLLGGYES LVIYNDEGKL VYDSDWREEK VDDETLNKFI KMVRDELGSK GYEEYVKSSL 
LISDKSVKSM DDITKTALEV DGTVQDKLKN LFFIQAFMGL VNVELGAFIK SAGMEIEAGG 
FKDPKEVYEH IGDVDELTDD VISLVSLAGL KFGYDFKHGN