| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_1009 |
|---|
| Symbol | |
|---|
| ID | 8827966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 966779 |
|---|
| End bp | 968089 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003483380 |
|---|
| Protein GI | 289596684 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000000366199 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGA TGAGATACTC GAAGGAGGAG GTTAAGCGAT ACTATGACGA TGTAAGCAAG
TTCCTCAACA CCAAGTTCAA AGAGGGGCTG AAGGAGTTAA CGAAATCTGA GAGGGTACAG
GACTTGCTCA AAGTGAAGAA CCTATCCTAC AACTATTCTC TCTACAATAC CCTTCTAATA
ATCTCCCAGA AACCAGAATT GGCAGAGACG GGAGAATTAG TTTTACCACG CTACAAGTGG
GAGAAATTGG GTAGGCACAT AAACAAGGAC GCACAGCCAA TCTGGATATG GAGACCCAAT
CCAAAAACTA TCTACGAATA TCAGAAAAGG GACTTACCGC AGGAATTGAA GGATGTAAGG
GAATTGGCTC TAAAATCCAA ATCTCCGCAG GAATTCGCCA AAGCGTTGGA CGAGAAAGTG
GGTAATCTAT TGCAGCAGGA CAAGGTAAGT GCTATGGGTT TGGCTGGTGC AATAGCGGAG
AATTACGGAG ATAATCAGAA AGCATTAACG AACCTTTACT ATGACTTGAA AAGGGGCTAC
ATGACTGCCA AAGTTCCCAG AGGGGAAAGG ATGTATTTCA AGCCAGAGAA GGTTTATGCA
GAGAGCGATA CACACGGGAA GCCATTACCA GATTTGCGGT TCAAAACCCT GACGGGAAAC
GAGTATAGAA AATTCTACGA GATGATACGG GATTCCTCAC CCATACCCGT AGAGGAGATT
TACACCATAG GCAACACTAA CAAGTTGAAA TATCACGGGA AATACGATAT GAAAGAAGGA
AAGATAACAA TCGTGAGGAG CAAGAGCTAC AATCACATGC TTGGAACACT CATACACGAA
TTGGCACACG CAATAAGGCA CAAGGAAAGG ATGATGACGC CCGATAACAA TTTTGAGGAA
GCGGTTGTGG AAAGCACCTC AATATCCATT TTGTCCAGAA TGGGAGCGAA AGACGCATTG
CAGAAAAGGG GAGAGTATGT TTTAACTTTC CTCAACGCTC AAAAGGAGGA GGACTTGGAC
AAGGCAGGAA ACAAACTATT CCACGAAACG AACAGAACGG TTAGGAAACT CTTGGAGAAA
GTTCCAGCGA TAAACCACGC AATCTCCGAA GTGGATCGAC AGAGGATAGA ATACGAAGCC
AAACTAATGA AAGAAGCGAA GAAAGAGATG GCAAAGGAGA AGGAGAACTC CAAGGAAGTG
GAAGCACCAA AGGGTCCGGG AATGCAACCC CAAGAAATAG CTCACGCTCA AAATGTTCCA
AACCAGCATA GTGTTCCAAA TCAGCACAAA GAAGTGGAGG TAGAGTTATG A
|
|---|
| Protein sequence | MKKMRYSKEE VKRYYDDVSK FLNTKFKEGL KELTKSERVQ DLLKVKNLSY NYSLYNTLLI
ISQKPELAET GELVLPRYKW EKLGRHINKD AQPIWIWRPN PKTIYEYQKR DLPQELKDVR
ELALKSKSPQ EFAKALDEKV GNLLQQDKVS AMGLAGAIAE NYGDNQKALT NLYYDLKRGY
MTAKVPRGER MYFKPEKVYA ESDTHGKPLP DLRFKTLTGN EYRKFYEMIR DSSPIPVEEI
YTIGNTNKLK YHGKYDMKEG KITIVRSKSY NHMLGTLIHE LAHAIRHKER MMTPDNNFEE
AVVESTSISI LSRMGAKDAL QKRGEYVLTF LNAQKEEDLD KAGNKLFHET NRTVRKLLEK
VPAINHAISE VDRQRIEYEA KLMKEAKKEM AKEKENSKEV EAPKGPGMQP QEIAHAQNVP
NQHSVPNQHK EVEVEL
|
|---|
| |