Gene Aboo_0978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0978 
Symbol 
ID8827935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp941510 
End bp944056 
Gene Length2547 bp 
Protein Length848 aa 
Translation table11 
GC content43% 
IMG OID 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003483349 
Protein GI289596653 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000062571 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAGG TACTCATATA TGGACTCAGC CTTGCATCTT ATCGTGCTGC TGCCAATTTC 
GCTCGGGCAG GGCACAAAGT AATATTGCTA AATCGTGGAG AGTTTATATG GCACAAATTT
ACCCAGATGC AGTGGCAGAA TCCCCGTGAC ATAATAAATG GATATTCTAA AGGCATCTTG
CTTAATGTTG CAAATATGAC AGGAAATATA GAGGTTTATC ATAACTCTGA GTTACTGGGG
GTGGAAGGAG GCCCTGGAAA TTTTAAGGCG AGATTTAAGC ACAGGCCACA GAGTGTAAAT
GAGTTCAAAT GTATAGGTTG TGATTTATGC CATGAGAAAT GTGATGTCAA GTTCATTCCT
ATGCCCCTTG GTCCAGGAAT GAGAATAATC AAGAATGCAG AAGAGTGTTT GGATGTGTGT
CCAGTAAAAG CCATTCAAAT TCCTAAAGAA GAAGAGAAAG AGGAGAAAGT GGATGCTGTT
ATACTCTCTC CAGAATACGA GCCTGAGGAT ATAAAGAAAT ATGTTGGGGA TAAGAAGTTC
ACCATGCCTT TCAGAGATTT TGCCTTCATG TTCAGGGGTA AGGGTGTAGA AAAGCAGTTC
TTGAAGAGAG AAGACGGCAA AACTCCAGAA TCTCTTGGAT TTTTCATACC CGCAGGATTT
GAAGGATACC TCGGCTCTTA TGAGGAGCAT GTGATAGTAT TCCGAGAGGC ATTGAACATG
AAGGAGATGG ACCCAAGTTT GGATGTTCAC ATATTCATGA AAGAAGTCCG TCTTTACGGC
CATAATCAGA TGGCTTTATA CGATAAAGCG ATAGAAAAGG GAATAAATGT GCATATTATA
GATGAATTGA ACATAGAGGA GAAGGACGAT TATCTTGTGG TGAATGATGT TAATATAGAT
TTGCTCGTTG TTATGCCTGG TCAAAAGATA CCTGAGGATT GGAAGAATCT TGCTCAGAAT
CTTGGTTTAG AGACAGAGCA TGGATTTGCA GTTACTAAGC CATTCACATT TGAAACCACG
AAAGATGGAA TATTTGCCAT TGGTGAGTTT GTGAAGCCCG TTGGTAGTGC CGAAGCCATA
TACCAAGGCA CAGCAATAGT GCCTCAGGCA GAGAAGTATC TCAAACCGCC AGAGGAGCCA
CCGAAGAGAG AAGAAGTTGA ATGGCTCCGT GATGATTTCA ATCCAAAGGT TGGAGTGTTC
ATGTGCAGGT GCGCTCTTGG AAATCTAAAT CCAAAAGTGG ATGCAGATTA TGTCATAGAA
AAAGATTATC TTTGCTTGCA TCCAGAGGAT ATTGTAAAAG AAATAAAAGA GAAGGGCATA
AATCGTGTTG TGTTTGCTGC ATGTAGCCCT GCTTTGAGAG GTGCTATGTT AGAAATGGTT
GCTTCTCAGG CAGGTATTCA TCCCTCGTAT GTAGAGCTTG TACAACTCAG GGAATATGTA
TCTAGGGTTG GAGGAGATGA TAGAAAAGCA AGTGCAATGA TCAATGGCGC AGTGGCTAAA
TCTAAAGCAA GTTATTTTGT GGATATACCA ACGAGTGCCG TAACCAAGGG AGTTGCCATA
ATAGGAGGAG GACTTGCATC TCTAATTGCG GCAGATTATC TAGCTGAGAA AGTTCCTCTC
GTTTATATCA TAACTAAAGA GTTTGATACA CCTCATAATG CTACGGGTGT GAAGGGTAAT
GTTCTCCATA TAAGCGATGA TGAGTTGAAC TCTTGGTACA ATTCTCTTAA AGATAGGGTT
CTTAAGAGAG CCAAGTGGAT AAAGGAGGAT GTAGAGAGTA TTGATGGATA CCTCGGCAAT
TTCGTACTTA AGGCGGGAGA GGAAGAAATA AAGGCAGGAG TGCTAATAAT AGCCACAGGT
GGAGATGTTG TAGAAGGAGG AGAGCATATA ACCTCCCGTA TGGAAGGGAA TACCCTCCAC
TCATCTCTTG CCTCTCTTTA TGCAAAGAGG AAAGGTGTCT CCGGAACATA TGATTTAATG
AAATCCTACT CCTTGCTTGA TGTTGAGCCC CCAGAGGCAA AGCGTGGTGA GGGAGAGCCG
ATAGCATATG TGAAACCAAG GGAGATTAAC AAGAAGATTG CAGAGATGCT GGGCATGAGG
ATAGATAAGG AGGGATTCTT GTTCTTTGCT GAAGAGCCCA GGGAATGGGT TGAGCGTGTT
GGCATACAGT TTACACTTCT TGAAGATGCC TTTGGAGGAA TTTTTGTAGC TGGACTTGCC
CATAGGCCAA TGAGCATTGA GGAAGAGGTT GAAGAGGCAG GTTTTGCAGC TCAAAGCGCT
ATTTATTTAA TGAATGATAG GCCATCTCCA GCAGGAAAGT TTGTAAGCGT GACGAATCCC
AGGAGATGCG CTGGATGTGG AATATGCGTA GATGCCTGTT TTGCAGGCGC AAGGTATATT
GATGAGGAGG ATCATATTGC CAAGGTCAGA ACCGAGCTTT GCGTGGGCTG TGCTGCATGT
GCAAATGCAT GCCCAAGCGG GGCTGCGGTT GTCATGCCGT ATAATCCAAA TGGAGTGTTT
AAAATGTTAA AGGAGGTAGT AAAATGA
 
Protein sequence
MGKVLIYGLS LASYRAAANF ARAGHKVILL NRGEFIWHKF TQMQWQNPRD IINGYSKGIL 
LNVANMTGNI EVYHNSELLG VEGGPGNFKA RFKHRPQSVN EFKCIGCDLC HEKCDVKFIP
MPLGPGMRII KNAEECLDVC PVKAIQIPKE EEKEEKVDAV ILSPEYEPED IKKYVGDKKF
TMPFRDFAFM FRGKGVEKQF LKREDGKTPE SLGFFIPAGF EGYLGSYEEH VIVFREALNM
KEMDPSLDVH IFMKEVRLYG HNQMALYDKA IEKGINVHII DELNIEEKDD YLVVNDVNID
LLVVMPGQKI PEDWKNLAQN LGLETEHGFA VTKPFTFETT KDGIFAIGEF VKPVGSAEAI
YQGTAIVPQA EKYLKPPEEP PKREEVEWLR DDFNPKVGVF MCRCALGNLN PKVDADYVIE
KDYLCLHPED IVKEIKEKGI NRVVFAACSP ALRGAMLEMV ASQAGIHPSY VELVQLREYV
SRVGGDDRKA SAMINGAVAK SKASYFVDIP TSAVTKGVAI IGGGLASLIA ADYLAEKVPL
VYIITKEFDT PHNATGVKGN VLHISDDELN SWYNSLKDRV LKRAKWIKED VESIDGYLGN
FVLKAGEEEI KAGVLIIATG GDVVEGGEHI TSRMEGNTLH SSLASLYAKR KGVSGTYDLM
KSYSLLDVEP PEAKRGEGEP IAYVKPREIN KKIAEMLGMR IDKEGFLFFA EEPREWVERV
GIQFTLLEDA FGGIFVAGLA HRPMSIEEEV EEAGFAAQSA IYLMNDRPSP AGKFVSVTNP
RRCAGCGICV DACFAGARYI DEEDHIAKVR TELCVGCAAC ANACPSGAAV VMPYNPNGVF
KMLKEVVK