Gene Aboo_0971 details

Gene Information

• Locus tag: Aboo_0971
• ID: 8827926
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: -
• Start bp: 933534
• End bp: 934079
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 41%
• Product: TATA-box binding family protein
• Protein accession: YP_003483342
• Protein GI: 289596646

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGAAAG TGCAAATAGA GAATATAGTG GCTTCTACCT CACTTGCAGA TAAGCTGGAT 
TTAAGCAAGA TTGCCCTTGC ATTAGATGGC GCTGAGTACG AACCAGAACA GTTTCCAGGA 
TTGATTTACC GTCTTCCTGA ACCAAAAACT GCCGTTCTCA TTTTCAGAAG TGGAAAGGTT 
AATTGTACTG GAGCAAAGGA TATTGAGAGA GTTGAAAAAA CCATAAAAAT ATTAGTGGAT 
AAATTGAAAG CTGCGGGCAT TGAAGTATAT GACAATCCAA AAATCGTTGT GCAGAACATT 
GTGGCTGTGT ATGATTTGGG AGTGGAGCTG AATTTAACGG ATATAGCAAT GTCCCTCGGA 
CTGGAAAATG TAGAGTACGA GCCAGAACAA TTCCCAGGAT TGGTGTATCG TATTGATGAG 
CCAAAAGTTG TGCTCCTTCT CTTTGGATCT GGCAAAGTGG TGTGCACAGG TGCAAAGAAG 
AAAGAAGAGA TCGTAGAAGC AATAAAGAAG CTCAAAAAAG AGCTCGAGAA TGTAGGGCTA 
ATCTAA 

 

Protein sequence

MEKVQIENIV ASTSLADKLD LSKIALALDG AEYEPEQFPG LIYRLPEPKT AVLIFRSGKV 
NCTGAKDIER VEKTIKILVD KLKAAGIEVY DNPKIVVQNI VAVYDLGVEL NLTDIAMSLG 
LENVEYEPEQ FPGLVYRIDE PKVVLLLFGS GKVVCTGAKK KEEIVEAIKK LKKELENVGL 
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