| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0970 |
|---|
| Symbol | |
|---|
| ID | 8827924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | + |
|---|
| Start bp | 931803 |
|---|
| End bp | 933338 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | citrate lyase, alpha subunit |
|---|
| Protein accession | YP_003483341 |
|---|
| Protein GI | 289596645 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATAA ATGCGGTAGG TCGTGAGGTA CCAAGTGAGA TAAACGGGCA AAGGTTCAAG
CCATTTGCAG GAGATTTGAA AACTCCTCCA GAAGGAAGGC GTGCAGGTTC TCTTATAAGA
ATGGCTCCAA GAAGCAGAAG TAAGGTTGTA AATTCATTGG AGGAAGTAAT CAAAAAGGTT
GGGTTGGAGG ATGGAATGAC CGTGAGCTTC CATCATCACC TTCGCAACGG GGATTTCGTT
GTGAATATGG TTATGGAGAC AATAAGGAAG ATGGGAATAA AGGATATCCG TGTATTTCCA
ACTGCGTTAT TTCCCGTTCA CGAGCCCTTA GTGCCCATGC TCACCGATGG AACCATAAGG
AGAATAGAGG GAAGTATGAA TGGACCATTG GGTGAGGCAA CAAGCTATGG AGTTATGCGT
GAAACAGCAG TGCTTCGCTC CCATAGTGGA AGGGTTCGAG CCGTGGAAAG CGAAGAGGTG
CATATTGATG TTGCTTTTAT AGCCGCTCCT ACTGCAGACC CTTACGGAAA TTTAAATGGC
GTTGATGGTC CTTCTGCCTG TGGACCTTTG GCGTACGGAA TGGTGGATGC TTACCATGCT
GATCACACTG TTGCAATAAC TGATCATCTC GTACCTTACC CTGCTCATCC AATAAGCATA
TTCCAGCATC AGATTGATTA TGTGGTGCCT GTGGATAGGA TAGGAGACCC GCAGGGAATA
ATGTCAGGAA CTCTGCGCAT AACTACATCT CCATCAAGGT TAAAAATTGC AAGATATGCC
TTGGAAGTTA TAGATAGAGT GGCTTTGAGA GATGGCTTTT CTTTCCAAGC GGGAGCTGGA
GGAATATCTT TGGCAGTTAC GAAATTCCTT GGAGATTTGA TGCGTAAAAG AGGAATAAAA
GCATCTTTTA TCAATGGGGG AGTTACAAAA TATGTGGTGG ACATGCTCCA TGAAGGCCTT
GTGGATGTTG TATTTGATGG GCAGGCCTTT GACTTGGATG CAGTAAAGTC TCTAAAAGAG
GATAAAAACC ATATAGAAAC TCCACTTGCA ATGTATGGTA ATCCGTATTC TTCTGGTGGA
ATAGTGAATA TGCTTGATGT AGGGGTTCTA GGAGCTACAG AAGTAGACAT AGATTTCAAT
GTGAATGTGA ATACCCACAG TGATGGCTTG CTTCTTCACG GCATAGGGGG GCATCAGGAA
GTTGCTGCTG GTTCTGCTTT GACAATAATA ACTGTACCAT TGTACAGATA TCGGGTTCCC
GTGATTCGTG AGAGAGTTAC CACGGTGACC ACTCCTGGAG AGGTTGTTGA TGTGGTGGTA
ACAGAACATG GCATAGCAAT AAATCCAAAA AGAGATGATA TAATTGAGGC AATGCGCGGC
AGTAAGGTAC CTATATGGGA TATCCAAGAT CTGCAGAAGA AAGCATATCA AATTTGCGGA
AAGCCTCAGG AGCCTAAAAC CACAGATGAC ATAATAGCAG CAATACTCTG GCGTGATGGC
ACTATTATCG ATGTTGTTTA TAAGGTCAAA AAATAA
|
|---|
| Protein sequence | MPINAVGREV PSEINGQRFK PFAGDLKTPP EGRRAGSLIR MAPRSRSKVV NSLEEVIKKV
GLEDGMTVSF HHHLRNGDFV VNMVMETIRK MGIKDIRVFP TALFPVHEPL VPMLTDGTIR
RIEGSMNGPL GEATSYGVMR ETAVLRSHSG RVRAVESEEV HIDVAFIAAP TADPYGNLNG
VDGPSACGPL AYGMVDAYHA DHTVAITDHL VPYPAHPISI FQHQIDYVVP VDRIGDPQGI
MSGTLRITTS PSRLKIARYA LEVIDRVALR DGFSFQAGAG GISLAVTKFL GDLMRKRGIK
ASFINGGVTK YVVDMLHEGL VDVVFDGQAF DLDAVKSLKE DKNHIETPLA MYGNPYSSGG
IVNMLDVGVL GATEVDIDFN VNVNTHSDGL LLHGIGGHQE VAAGSALTII TVPLYRYRVP
VIRERVTTVT TPGEVVDVVV TEHGIAINPK RDDIIEAMRG SKVPIWDIQD LQKKAYQICG
KPQEPKTTDD IIAAILWRDG TIIDVVYKVK K
|
|---|
| |