| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0969 |
|---|
| Symbol | |
|---|
| ID | 8827923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | + |
|---|
| Start bp | 930954 |
|---|
| End bp | 931802 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | |
|---|
| Product | Citrate (pro-3S)-lyase |
|---|
| Protein accession | YP_003483340 |
|---|
| Protein GI | 289596644 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTC GAAGAACTCG TTTATATATC CCTGGAAACA ATCCACATCT TGTTGAAAAT
GCTGGGTTGT ATGGTGCGGA TGCTGTCATT CTTGATCTTG AAGATTCTGT GCCAATAACC
CAAAAATTTG ATGCAAGAAT ATTGGTGAAA TATTCCCTTC AGAATGTCGA TTTTGGAAAG
AGCGAGAAAT GGGTCAGAAT AAATGGAATT GATACTCCAT ACTGGAAAAA GGACTTAGAG
GAGATATTGC CATATTGCGA TGTTATAAAT CTCCCCAAGG TTGAAAGCTT GGAGGATGTC
AATGCTGCTG ACCAGGAGAT GAGTTTGATT GAAGATGATA ATGGGTTAGA GCCAAGAAAG
CTCGTGCCTA TTATTGAGAC TGTCAGGGGA TTAAAGAATG CAAGGGACAT TGCAACTCAT
CCTCGTGTTG TCGCTCTTGC TTGGGGTGGC GAAGATTTAA CTGCAGATTT AGGAATACCG
AGGAAGAAGG CTTTAATTCT TGATTATGTT CGCGCTGAAA TAGTTTTAGC TGCTAAGGCA
GAAAAGAAGC AGGCTTTAGA CACTGTATTT AGCAATGTTA AGGACACGGA GGGTTTATTC
AACTACGCTC AGCGTGCCAG GTACATGGGA TTTGATGGGA TAGGTGTGAT TCATCCAAAC
CAAATTGAAG TAGTGCACAG GGCCTTTAAA CCAACGGATG AAGAGATAGA AGAGGCAAGG
AGAATAATTG AGGCAGCTAA GGAAGCTGAG AGGGAAGGTA AAGCTGTGAT TTCTCTAAAT
GGAAGGATGA TAGACCCGCC TGTTGTAGAA AGAGCAAGGA AAATTTTGGC TCTTGCGGAG
GTGGATTAA
|
|---|
| Protein sequence | MKLRRTRLYI PGNNPHLVEN AGLYGADAVI LDLEDSVPIT QKFDARILVK YSLQNVDFGK
SEKWVRINGI DTPYWKKDLE EILPYCDVIN LPKVESLEDV NAADQEMSLI EDDNGLEPRK
LVPIIETVRG LKNARDIATH PRVVALAWGG EDLTADLGIP RKKALILDYV RAEIVLAAKA
EKKQALDTVF SNVKDTEGLF NYAQRARYMG FDGIGVIHPN QIEVVHRAFK PTDEEIEEAR
RIIEAAKEAE REGKAVISLN GRMIDPPVVE RARKILALAE VD
|
|---|
| |