| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0956 |
|---|
| Symbol | |
|---|
| ID | 8827910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 920279 |
|---|
| End bp | 920917 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | |
|---|
| Product | ribonuclease HII |
|---|
| Protein accession | YP_003483327 |
|---|
| Protein GI | 289596631 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTGTG GCGTTGATGA GGCTGGACGA GGTCCTGTTA TAGGCCCGCT GGTAGTGGCA
GGTGTTTGCG GAGAGGAAAG CAAAATCGCA TCTTTGAGAG TAAAAGATTC AAAAAAATTG
AGTCCAAAAA GGAGGGAGAG ATTGGCAGAA GAAATAAAGA AAGTTGCATC CAAGATAGTT
GTGATAAAAA TCGAACCAGA GGAGATCGAT GCACTAAGAG AGAAAATGAC TTTGAATGAG
ATAGAAGTTG AACTTTTTGC AAGAGTAATC TCTCAGTTGA ACGGAGATAA GGTGTATGTG
GATGCAGCCG ATGTTAATGA AGATAGATTT GCTGAGGAGA TAAAGAAAAA ATTGGGAAAA
GATGTAGAAA TAATATCGGA ACACAAGGCG GATTCTAAGT ATCCGATGGT AAGCGCTGCA
TCCATAATTG CGAAGGTTGA AAGGGATAGA ATAATTAATG AATTGAAGAA AGAACTTGGA
GAGTTTGGCT CAGGATACCC TGCAGATGAG CGAACAAAGA GATTCTTAGA AAAATATGTG
AAAGAGCATA ATGAATTGCC ACCTCATACA AGGCATTCTT GGAAGAGCGC AAAGAGAGCA
ATGAAGAAAA AAGAGCAGAA GAAATTGGGG GATTTCTAG
|
|---|
| Protein sequence | MSCGVDEAGR GPVIGPLVVA GVCGEESKIA SLRVKDSKKL SPKRRERLAE EIKKVASKIV
VIKIEPEEID ALREKMTLNE IEVELFARVI SQLNGDKVYV DAADVNEDRF AEEIKKKLGK
DVEIISEHKA DSKYPMVSAA SIIAKVERDR IINELKKELG EFGSGYPADE RTKRFLEKYV
KEHNELPPHT RHSWKSAKRA MKKKEQKKLG DF
|
|---|
| |