Gene Aboo_0918 details

Gene Information

• Locus tag: Aboo_0918
• ID: 8827871
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 870864
• End bp: 871433
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 39%
• Product: protein of unknown function DUF358
• Protein accession: YP_003483289
• Protein GI: 289596593

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000000000434231
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAGCTT TTTTAGTTAT AGGGCACAAA TTTAAAGGGG AGATAAATTT AAACGACCTT 
CCTGGCTCTG GGAGAATAGA TGTTATTGCA AGATGCATAA ATGCTGCCAT ATTTCTCTCC 
CACAACATAA GGAGAGATGT TCTATTCTTC GCTTACTTCC CACAAATCAA TGCTCGTTTA 
CGAATTGATT CCTCGCAAGT TAAGTATTTA AATCCCGATG AGAGAAGCAC AGCTGCCTTA 
ATAAGAAATG CCATTTTAAA ATTAGGAGAG AGTGAGATTA AGAGTTCTCC AGGATTTTAC 
ATAAAAAGGG CTAGTTTTGA AGAAGTTTTA AATGAAATTG CAGAAATAGG CAATGTATAT 
TATTTGCGTG AAGATGGAAA GGACATAAGG GAGCTGGAGT TTCCGGCTAA TGCATCCTTC 
GTATTGAGCG ACAGCGTAAA TATGAGTGAA GATGAAGAGA AGCTTGTGGA TAAATATGCG 
GATGATATCG TAACTGTGGG GCCGAAGATC ATACTAGCTT CTCACGCCAT ATCCATTGTG 
CATAACGAGT TAGACAGGCG ATTTCCATGA 

 

Protein sequence

MRAFLVIGHK FKGEINLNDL PGSGRIDVIA RCINAAIFLS HNIRRDVLFF AYFPQINARL 
RIDSSQVKYL NPDERSTAAL IRNAILKLGE SEIKSSPGFY IKRASFEEVL NEIAEIGNVY 
YLREDGKDIR ELEFPANASF VLSDSVNMSE DEEKLVDKYA DDIVTVGPKI ILASHAISIV 
HNELDRRFP