Gene Aboo_0897 details

Gene Information

• Locus tag: Aboo_0897
• ID: 8827847
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 853313
• End bp: 853999
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 40%
• Product: ABC transporter related protein
• Protein accession: YP_003483268
• Protein GI: 289596572

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTAAAG TTGAAAATTT AAGACTCGTG CGTGAGGGTA AGGAGATTTT GAAAGGTGTT 
AATTTTGAAA TTGCCCAAAA TGAAATTCAT TTAGTCCTCG GGGTTAATGG CTCAGGAAAA 
ACTACTTTGG CACAGGCAAT AATGGGGATA TATCCCTGTG ATGGTAGAAT AATCTTTGAA 
GGTAAAGACA TTACGAATCT TTCGGTTTGG GAGCGTGCCA GGATGGGAAT AACCCTTGCA 
TTTCAGGAGC CTGCAAGATT TGAAGGCCTT TTGGTTAAGG ATTATCTTAT GGTGAGTGCT 
AAAACCAAGA GTATGAGCAA ATTAGAGGAG ATAATAAAGA TGGTTGGTTT GCCAAGAAAC 
ATTTTATTTC AAGAGGTGGG TGAGAATTTA AGTGGGGGAG AGAGAAAAAG AATAGAACTT 
GCATCAGTAC TCTTAATGGA GCCTAAGCTC GCTATGTTGG ATGAGCCAGA TAGTGGGATA 
GATATGCTGT CTTTCAGATT AATTTCAGAG GTTATAAAGA GGATGAAGGG TATGGGTACA 
TCTGTTATGC TTATAACCCA TAGCGAAGAG ATGATAGATA TAGCTGATCG AGCTACAATT 
TTATGCTCTG GTAAAGTTGT TGCCAGTGGG GAGCGGGAGG AGATAAAGAA ATTGTTTAAG 
TACTCACCAT GTCCTTTGAA GAGGTGA 

 

Protein sequence

MLKVENLRLV REGKEILKGV NFEIAQNEIH LVLGVNGSGK TTLAQAIMGI YPCDGRIIFE 
GKDITNLSVW ERARMGITLA FQEPARFEGL LVKDYLMVSA KTKSMSKLEE IIKMVGLPRN 
ILFQEVGENL SGGERKRIEL ASVLLMEPKL AMLDEPDSGI DMLSFRLISE VIKRMKGMGT 
SVMLITHSEE MIDIADRATI LCSGKVVASG EREEIKKLFK YSPCPLKR