Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_0883 |
Symbol | |
ID | 8827833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | + |
Start bp | 841346 |
End bp | 841987 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | Peroxiredoxin |
Protein accession | YP_003483254 |
Protein GI | 289596558 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0000013318 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTAGTGA TAGGAGAAAA ATTTCCGGAG GTAGAGGTTA ATACAACCCA TGGAAAAATG AAGTTGCCAG ACCACTTTGC TGGGAAGTGG TTCGTACTGT TCTCTCATCC AGCGGACTTC ACACCAGTGT GCACAACGGA GTTCTACGCT ATGCAGAAAA GATTAGATAA ATTCAAAGAG CTAGGTGTTG AAGTGATAGG ACTAAGCGTG GACCAAGTAT TTGCACATTT GAAGTGGATT GAGTGGATCA AAGATAATCT CGGGGAGGAG ATACAGTTCC CAGTTATTGC GGATGATCGC GGAGATCTTG CAGATATGCT CGGCATGATA CCCACGGGTT CCACGCAGAC AGCCAGGGCG GTGTTCATTG TAGATCCTAA AGGAACAATA AGGGCTATAG TGTACTATCC AGCTGAGCTC GGTCGTGACT GGGACGAAAT TCTACGTGCT GTGAAGGCTC TGCAGATAAG CGATGCTAAT GGTGTGGCTA TGCCGCACAA GTGGCCCAAC AATGAATTAA TCAAGGACCG TGTCATCGTG CCTCCCGCTG GAAGCGTTGA TGCAATAAAG GACAGGGAGG AGGCCAAGAA AAAGGGCGAG ATTGAGTGCT ACGACTGGTG GCTCTGCCAC AAATCACTCT GA
|
Protein sequence | MVVIGEKFPE VEVNTTHGKM KLPDHFAGKW FVLFSHPADF TPVCTTEFYA MQKRLDKFKE LGVEVIGLSV DQVFAHLKWI EWIKDNLGEE IQFPVIADDR GDLADMLGMI PTGSTQTARA VFIVDPKGTI RAIVYYPAEL GRDWDEILRA VKALQISDAN GVAMPHKWPN NELIKDRVIV PPAGSVDAIK DREEAKKKGE IECYDWWLCH KSL
|
| |