Gene Aboo_0871 details

Gene Information

• Locus tag: Aboo_0871
• ID: 8827821
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: -
• Start bp: 834737
• End bp: 835474
• Gene Length: 738 bp
• Protein Length: 245 aa
• Translation table: 11
• GC content: 35%
• Product: sugar fermentation stimulation protein
• Protein accession: YP_003483242
• Protein GI: 289596546

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.000605293
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCTGCC ATAATTATGG AGAGGGTAAA ATAATCCTCA CTATGCCGTA TGATTCAAAA 
GGTATATTTT TAAAACGCCC CAATAGATTT TTAGGCAAAG TTTTGATAAA TGGCAAAGAG 
GAGCTGGTAC ATATCCATGA CCCAGGGAGA CTTTCTGAGT TGCTCTATGA GGGGAATGAG 
GTACTATTAA AAGAATATAA TAACAAAAAA AGAAAAACAA AATGGGAATT AATAGGAGCA 
AAATATAAAG GAAACTGGAT TTTCACAAAC TCAAAATTTC ACAGAGTTAT CTCTGAGAGA 
ATATTGAAAG ATGCGGAAAT ATCCCCTTTT GGTAAGGTTG ATGAAATAAG GGCAGAGGTA 
AGAGTTGGAA AGAGCAGGAT AGATTATCTC CTAACAAAGA ATGGAAAGAG GATTTGGGTT 
GAGGTCAAAG GATGCACTTT GGAAGAAAAT GATATTGCTC TCTTTCCAGA TGCCCCCACT 
GAAAGGGGCA GAAAGCATGT TGAAGAATTA AAAAAATTAA TTGAAAAAGG AGACAATTCT 
GCGCTCTTGA TATTGGTATT CCACCCATAT GTGAAATGTT TTACTCCCAA CGAGAAGAGA 
GATGAAAAAT TCGCAGAATC ATACTGGAAT GCGATTAACA AAGGCTTGAA AGTTCATCCT 
GCTCTTTTAC AATATGATGG GAAAAACATA ATTTTCAAAG GATATACTTC ATTATGTAAA 
AATATTCATA AAGGTTGA 

 

Protein sequence

MSCHNYGEGK IILTMPYDSK GIFLKRPNRF LGKVLINGKE ELVHIHDPGR LSELLYEGNE 
VLLKEYNNKK RKTKWELIGA KYKGNWIFTN SKFHRVISER ILKDAEISPF GKVDEIRAEV 
RVGKSRIDYL LTKNGKRIWV EVKGCTLEEN DIALFPDAPT ERGRKHVEEL KKLIEKGDNS 
ALLILVFHPY VKCFTPNEKR DEKFAESYWN AINKGLKVHP ALLQYDGKNI IFKGYTSLCK 
NIHKG