Gene Aboo_0807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0807 
Symbol 
ID8827757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp769439 
End bp770653 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content50% 
IMG OID 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_003483178 
Protein GI289596482 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCTTC TCAAAGACGC GAGCAATGTG GAAGATTACC TCGCGCAAGG TGGTTTCAAG 
GCGCTCCGCA AGGCATTGGA ATACGGGCAA GATGAAATAA TAAGCGAGGT GGAAACCTCT
GGGCTTTTGG GGCGCGGAGG AGCAGCTTTC CCTACTGGGC TGAAGATGAA ATTCGTTAGA
AAAGAGAGAA AGACTCCGAA GTACATCGTG GCCAATGCGG ACGAGGGAGA GCCAGGAACG
TTCAAAGATA GAGTGCTCAT GGAAAGAAAC CCGTACCAGA TATTGGAAGG GATGATAATC
TCCGCTTATG CCATAGGTGC CAAGAAGGGA TTTTTCTACA TTCGCTACGA ATATAAGGAG
ATCGCAAAGG ACATAGAGAG AAAAATAGAG GAATTGCGAA GACTCGGAAT ATTGGGCCCG
AATATATACG GCTCAAAATT CTCATTCGAC ATCGAACTCG TTGTCGGGGC GGGAGCATAT
GTTTGCGGTG AAGAAACGGC GCTGATGGAG AGCATCGAGG GAAAGAGGGG GTACCCGAGA
ATAAAGCCGC CATACCCGGC GCAGTACGGG CTGTGGGGGA AGCCGACGCT AATCAATAAT
GTGGAGACTC TCGCGAATGT TCCCCTTGTG ATGAGCATGG GTGGAGCGAA CTACAGCAAA
TTGGGAAAGG AGGGCTGCAC AGGGCCCAAG CTATTCAGCG TGAGCGGGTT CGTGAAGAAT
CCGGGGGTTT ACGAGGCGAA TTTGGGGGAG AAAACTATTG GAGAGATGAT CGAGCTCGCC
GGGGGAGTTG TGGGAAAATT CAAAGGAGTT ATGCTGGGTG GCGGAGCCGC GGGATTTATA
CTCACCGAAG AGTACTTAGA CATGCCTCTT TGCTTTAAAG ATGCAAAAGA GCGCGGCTTA
TTTTTAGGCA CAGGAGATAT AATCGTTTTC AACGAATCCG TAAATATTTG GGATATCCTG
CTCAACATTG CGAAATTCTT CGAGCACGAG TCCTGCGGGC AGTGCTTCCC CTGCCGGTAC
GGAACCAAGA GGATGAGGGA AATAATCGAA AAAATTGTTC GCGGTGATGG AAGAAAAGAG
GATATTGAAA AATTGAACGC CACTGCAAAG GCGATGAAAA TAGCCTCGTT ATGTCCTCTG
GGCACGAGCG CGATGCTCGC CTACGAATCT GCAATGAAGA ATTTCCGCGA GGAGCTCATG
GGGGTGATTC AATGA
 
Protein sequence
MLLLKDASNV EDYLAQGGFK ALRKALEYGQ DEIISEVETS GLLGRGGAAF PTGLKMKFVR 
KERKTPKYIV ANADEGEPGT FKDRVLMERN PYQILEGMII SAYAIGAKKG FFYIRYEYKE
IAKDIERKIE ELRRLGILGP NIYGSKFSFD IELVVGAGAY VCGEETALME SIEGKRGYPR
IKPPYPAQYG LWGKPTLINN VETLANVPLV MSMGGANYSK LGKEGCTGPK LFSVSGFVKN
PGVYEANLGE KTIGEMIELA GGVVGKFKGV MLGGGAAGFI LTEEYLDMPL CFKDAKERGL
FLGTGDIIVF NESVNIWDIL LNIAKFFEHE SCGQCFPCRY GTKRMREIIE KIVRGDGRKE
DIEKLNATAK AMKIASLCPL GTSAMLAYES AMKNFREELM GVIQ