| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0726 |
|---|
| Symbol | |
|---|
| ID | 8827672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | + |
|---|
| Start bp | 689699 |
|---|
| End bp | 690712 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | |
|---|
| Product | isopentenyl-diphosphate delta-isomerase, type 2 |
|---|
| Protein accession | YP_003483099 |
|---|
| Protein GI | 289596403 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.114214 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAGA ATCGCAAGTT AGAGCACATA AAAATATGCG CTGATAAGGA TGTTAATTCC
CATCACAATT ACTGGAATGA TGTAGTGTTA AAGCACGAAA CTATCCCCAA AGTTGATATG
GAAAATGTAG AACTGAGTGT GGAATTCTTA GGAAAGAAGT TAAATTATCC GATTATAATA
GATGCAATGA CGGGGGGACA TAAGGTTGCA AAGCTCATTA ATGAAAATCT GGCGGCTGCG
GCGGAAGAGC TTGGAATAGG CATGGCTGTT GGCTCACAGA GAGCCGCAAT AGAGAATACA
AAGCTGGAAG ATACATATTC TGTGGTGGCA AAATACGATA TGCCCTTGAG AATAGGAAAT
CTGGGTGCAC CTCAATTTGC GTTGGGGTAT GGAGAGGAGG AGGTAAAAAA GGCCATTGAG
ATGATTGATG CCCATGCCAT AGATATTCAC TTCAATTATT TGCAGGAGGC AATACAGCCT
GAGGGAGATA CGAAGGTTGG CAATTTAAGG GAAAATCTTG CAGAACTTGC CAGGAAATAT
AAGTTGATAG CGAAGGAAAC AGGTGCTGGT ATAAGTAGAA ATGCAGCTGA ATTTTTCAAA
AATGCTGGAT TTAAGGCCAT TGATGTTAGT GGCGTGAGCG GTACAAGCTT TGCAGCCGTT
GAATACTACA GAGGTGGAGA AGAAGGTAAG CTCTTCTGGG ACTGGGGATT ACCTGCACCA
TACTGCATAT TGAGCTTGAA AGACTTAAAT ATGCCTCTAA TAGGCTCTGG GGGTATAAGA
AATGGACTCG ATGCCGCCAA AGCCATAGCT TTAGGTGCGG ATGTAGTTGG TATAGCCAGG
ATTTTGCTCA AGCCTGCTAT GAAATCCAAA GAGGATGTGA TAAAGGTACT GGAGAGGATA
ATAAAAGAGC TCAGAATCGC TGTGTTTTTA ATTGGAGCAG AGAGTGTGAA AGAGTTGAAA
AACGCCAAAT ATGTGGTTAG GGGTGAGCTT GCCCAATGGT TGAGACATTG TTAG
|
|---|
| Protein sequence | MIENRKLEHI KICADKDVNS HHNYWNDVVL KHETIPKVDM ENVELSVEFL GKKLNYPIII
DAMTGGHKVA KLINENLAAA AEELGIGMAV GSQRAAIENT KLEDTYSVVA KYDMPLRIGN
LGAPQFALGY GEEEVKKAIE MIDAHAIDIH FNYLQEAIQP EGDTKVGNLR ENLAELARKY
KLIAKETGAG ISRNAAEFFK NAGFKAIDVS GVSGTSFAAV EYYRGGEEGK LFWDWGLPAP
YCILSLKDLN MPLIGSGGIR NGLDAAKAIA LGADVVGIAR ILLKPAMKSK EDVIKVLERI
IKELRIAVFL IGAESVKELK NAKYVVRGEL AQWLRHC
|
|---|
| |