Gene Aboo_0712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0712 
Symbol 
ID8827658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp676230 
End bp677075 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content44% 
IMG OID 
ProductTransketolase domain protein 
Protein accessionYP_003483085 
Protein GI289596389 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0142999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAAA TATCCGAAAA CACAATTCGA GAATTAAAAC TTAAAGCCAA TGAAATCCGC 
ACTTGGGTTA TAAAGATGGT ATATGCTGCT CAATCCGGGC ATCCTGGTGG TGCGCTTAGC
GCCGCGGACA TTTTGGCTGT TCTGTATTTT CATGAATTGC AGATAGATCC TAAGAACCCA
GAATGGGAGG ACAGAGATAG ATTCGTTCTA AGCAAGGGAC ATGCCTCCCC AGCCTATTAC
GCTGCCCTTG CAATGCGCGG ATTTTTTTCA GAGAAAGAAC TTATGAAATT TCGTAAGGTG
GAATCATTCT TGCAGGGTCA TCCATCCTTA ATGGTTCCAG GAGTAGATAT GTGCACAGGC
TCGTTAGGTC AAGGATTAAG TGCTGCCATA GGAATGGCCT TGGCTGCCAA ACTGGATAAT
AAGGATTATC GGGTTTATGC CCTCCTTGGA GATGGGGAGA TTGAAGAGGG AAACATATGG
GAGGCAGCCA TGACTGCAGC CACAAGAAAA TTGGACAATT TAATAGCAAT AGTGGATAGG
AATAAAATTC AGTTGGATGA TTTCACAGAC ACAATGGTCG TGCTAGATCC ACTGGAAGAG
AAGTGGAATG CATTTGGATG GAGGGTGCTG AGTATTAATG GTCATGATGT TGTTCAACTT
ATCCGTGCTC TAGAAGAAGC GAAGAAAACA CAGGGAAAAC CCACAGTTAT AATTGCCCAT
ACTGTAAAGG GCAAGGGTGT GAGTTATATG GAGAACACAG CAAAGTATCA TGGCAAACCT
CCCCAGAGTG AAGAAGAATA TGTGCAGGCC CTAAAAGAAC TTGAGGAAGA GAGGCGAAGA
ATATGA
 
Protein sequence
MIEISENTIR ELKLKANEIR TWVIKMVYAA QSGHPGGALS AADILAVLYF HELQIDPKNP 
EWEDRDRFVL SKGHASPAYY AALAMRGFFS EKELMKFRKV ESFLQGHPSL MVPGVDMCTG
SLGQGLSAAI GMALAAKLDN KDYRVYALLG DGEIEEGNIW EAAMTAATRK LDNLIAIVDR
NKIQLDDFTD TMVVLDPLEE KWNAFGWRVL SINGHDVVQL IRALEEAKKT QGKPTVIIAH
TVKGKGVSYM ENTAKYHGKP PQSEEEYVQA LKELEEERRR I