Gene Aboo_0703 details

Gene Information

• Locus tag: Aboo_0703
• ID: 8827649
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 666289
• End bp: 667059
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 40%
• Product: TrkA-C domain protein
• Protein accession: YP_003483076
• Protein GI: 289596380

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 0.308951
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAGCTT TGATCTCATT ACTTTTAGTG ATACTCTTCT CCGTAATTTT TGTTAGAATA 
GGGGCAGTGG CTCTGGAGAT GACAGGTTTA TCAAGAGAAG TGGCTGCATT TCAGGCACAG 
TCAGCATACA CGGGAGTTGG ATTTACTACA TCAGAATCGG AGTATGTGGT ATCGCATCCT 
GTTAAAAGAA AGATAATTAG AACGCTGATG TTTGTAGGTA GTGCGGGGAT AGCATCGGCT 
ATTGCTATGC TGTTTCTTAG TTTTGTTGGA AAAACAGAGA AAGAGAGTTT GGATAGTTTA 
ATATATTTGG GAATAGGTCT TATTTTACTT TACTTCTTTG CCCGATCAAA ATTTATTGAC 
AGGGGATTAA GGTACATAAT AAAGAAATCA CTGCGGAAAT TTACAAAGTT GCATGTTTAT 
GATTATGAGC TTCTCTTGGG GCTTTCTAAA GGATACTCTA TTGGTCAATT TAAAGTTAGG 
CGCAATAGTT GGCTGGCAAA TAGAAAGCTC GAATCTCTTA AGTTGAAAGA AGAAGGTATT 
CTAGTTTTGG GTATTCACAG GAAGAGCGGA GAAAGAGAGA TCTTTATAGG TGCTCCGAAA 
GGGGAGGTTA CAATAAATCC TGGGGATGTA CTCGTGTGCT ATGGACCCGA TGAAGGCATA 
AAGAGGCTGT CTCACAGAAT AAAGGGTAAG AAGGGAGATA AAGAGCATAG AGAGGCCGTG 
AAGATGGAAA AGCTCAGGCA GATGGAGGAG AAAATGGAGA TATCCAAGTA A 

 

Protein sequence

MIALISLLLV ILFSVIFVRI GAVALEMTGL SREVAAFQAQ SAYTGVGFTT SESEYVVSHP 
VKRKIIRTLM FVGSAGIASA IAMLFLSFVG KTEKESLDSL IYLGIGLILL YFFARSKFID 
RGLRYIIKKS LRKFTKLHVY DYELLLGLSK GYSIGQFKVR RNSWLANRKL ESLKLKEEGI 
LVLGIHRKSG EREIFIGAPK GEVTINPGDV LVCYGPDEGI KRLSHRIKGK KGDKEHREAV 
KMEKLRQMEE KMEISK