| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0647 |
|---|
| Symbol | |
|---|
| ID | 8827593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 616719 |
|---|
| End bp | 617558 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_003483020 |
|---|
| Protein GI | 289596324 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTTGG CAATAATGTT CATCTATTAC CCAGCGAGCT CATTTCCATC CATATCCATC
ACGGGCGAGT TCTGCGCTTT AAAGTGCAAG CACTGCAATG GGTACTATCT CAAAGGTATG
CTTCCTATCA CAACACCAGA AAAACTAATT GATTTTGCAA AGAAAAATGA GGGAAAAATA
AAGGGTTTCT TGCTCAGCGG CGGCTCAACC AAGGAAGGAA AAGTTCCTCT AAAGAAATTC
GCTCCCGCAG TTAAATGGAT TGTGGAGAAT ACTTCACTCA TAGTAAATGT GCATACTGGG
ATAATTGATG AGCGAGATAT TGAATACCTT GAAGAAATGC AACCACATCA CATCTCCTTT
GATGTTATTG GCTCAACTGA AACAATAAAA AATGTTATTG GAATAAATAA GACAAAGGAA
GATTATTTCC ATGCCCTTGA CCTTTTAGAT TCTTCCTCTC TCAATTACTC CCCACACATA
ATTGCAGGAC TGGATTTTGG CAAAATAAAA GGAGAGTATG ACTCTTTGGA GAAAATAAGA
GAACTAAGAA GATTTAACAA TCTAGTGCTA ATTGTTTTAA TACCCACAAA GGGAACTCCT
ATGGAAGATG TCAATCTAAA TCGGGAGGAA ATCTTGAATT TTTTCAATTA TGCCCTATCT
ACCATTCCTC CCAAGAAAAT CGTACTTGGA TGCATGAGAC CCAGAGATTT TCACGAAATT
GAGGAACTCT GCGTTGAAAA GAATTGCAAG GGAATTGTCA TCCCCTCACC TAAAACTATG
CGAATGATGA AGGAGAAAAA TATGGAGATT ATTCGCAGAG ACATGTGCTG TGTCTTTTAG
|
|---|
| Protein sequence | MFLAIMFIYY PASSFPSISI TGEFCALKCK HCNGYYLKGM LPITTPEKLI DFAKKNEGKI
KGFLLSGGST KEGKVPLKKF APAVKWIVEN TSLIVNVHTG IIDERDIEYL EEMQPHHISF
DVIGSTETIK NVIGINKTKE DYFHALDLLD SSSLNYSPHI IAGLDFGKIK GEYDSLEKIR
ELRRFNNLVL IVLIPTKGTP MEDVNLNREE ILNFFNYALS TIPPKKIVLG CMRPRDFHEI
EELCVEKNCK GIVIPSPKTM RMMKEKNMEI IRRDMCCVF
|
|---|
| |