Gene Aboo_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0575 
Symbol 
ID8827520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp555963 
End bp557294 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content38% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003482948 
Protein GI289596252 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.858406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATGTC CCAGTTGTGG CAGGGATATT CCCGACGATT CCGAGATATG CCCATACTGC 
ACAGCCAGTA TAAAACACAG GGTTAGGATT AAAGCAATAT ATGTTATAGC ATTATCTTTG
GTAATCCTTG CTGCATCCTA TGGGGTGTTG GCGTATTATG GGGGAGAAGT TCCTATAACA
AAGATAAAAG ATTTGGGACT TACTGATAAT TATAATTTCA TCCGTTTGCA TGGGAAAGTG
GAAGGATATC CTTGGGTTTA TGAAAATGAT TATCAGGTAA CCTCATTTAG ATTCAAATTA
AATGATGGTA CTGGCACGGT GACTGTTAAG TTATATGGTA ATGTTATAAA AAGAATGGTT
GAACTGCATA AAATTCCGGC TATGGGGGAT ACTGTAGATA TCAAAGGTAC CTATATGTAT
AGTTCGAACT CTTTAATTTT GAACAATATA GATTATTTGG AGATAGAGAG CCCAAAACAT
AAGGGTTTGA ATATAAGCGA TATTATCAAT GCCGCTCCAT GGGACTATAA GAATGGTGCT
AAGGTTTTTG TAAGTGGGAA TATAACAAGT GTAAGAGAAT TCAGTTTCGG GTTTATATGC
ACTATAGATG AGAAACTTGA TGTTTTAATT CCCCGTGCTT ACTACTCTCT ACACATCTTG
AACATAAGTA AAATGGGGTC TGCTTATACT AAATTTTATG GTGCTCTGCA GTTCTATCAG
CCCGTTGCCC CTTCGGATAC ATACAAGGTT GTTAATCTTC CAGATTTGCT CTCCCATCCA
GAGGCTTATA ATGGAACATA TATTAGAATT ACCTGGGCAA GAGTTATGGA TAGGAATCTC
TTAACCAATA CTATAACTGT TTATTCAAAC GGCTCTTCAA TTCCAGTTTA TGTTAGAAAT
GGGGTGAAGT ATTATACTCC TGGAACCTAT GTGGAGATTC AAGGAAAATT TGTAAATTAC
AAGGGCACAT GGGAAATTTC TGTATCTCAT AAGAACGATT TTGTAACAGA GCCAAAGTGG
GAGTTGATAG CAGACCCAAC ATACAAAGTT TTAGAGAAAA AAGAGTATGT GCCAAATGGC
CCTATGAAAG AGTTCTCCCT TGTTGAGATT AAAGGCAGCG TCGTAGATTA CCGTATGTTC
TCTTATTCTG CGAGCTTAAC CATTTGGGGC AACAACCAAA GCTATGTGGT TTATGTTGAG
AATAAGGCAA TGATGAAAAA TATAGATTAT GGAAGGCCTG TTGTTATTAG GGGTATCGTT
ACATATTATA ATGGTCAGCC GGAGATAAAG GTTAGACCAT TTACCGGTGA TTTGGTGGAG
GTGACTGGAT GA
 
Protein sequence
MKCPSCGRDI PDDSEICPYC TASIKHRVRI KAIYVIALSL VILAASYGVL AYYGGEVPIT 
KIKDLGLTDN YNFIRLHGKV EGYPWVYEND YQVTSFRFKL NDGTGTVTVK LYGNVIKRMV
ELHKIPAMGD TVDIKGTYMY SSNSLILNNI DYLEIESPKH KGLNISDIIN AAPWDYKNGA
KVFVSGNITS VREFSFGFIC TIDEKLDVLI PRAYYSLHIL NISKMGSAYT KFYGALQFYQ
PVAPSDTYKV VNLPDLLSHP EAYNGTYIRI TWARVMDRNL LTNTITVYSN GSSIPVYVRN
GVKYYTPGTY VEIQGKFVNY KGTWEISVSH KNDFVTEPKW ELIADPTYKV LEKKEYVPNG
PMKEFSLVEI KGSVVDYRMF SYSASLTIWG NNQSYVVYVE NKAMMKNIDY GRPVVIRGIV
TYYNGQPEIK VRPFTGDLVE VTG