Gene Aboo_0574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0574 
Symbol 
ID8827519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp555160 
End bp555966 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content38% 
IMG OID 
Productnucleic acid binding OB-fold tRNA/helicase-type 
Protein accessionYP_003482947 
Protein GI289596251 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGATA GATACTGTCC TAATTGCGGC AGATATGTGG GTTCATTAGA AGTTTGCCCG 
TACTGTGGCA CTAAGATACC AAAGCATACC GGGTATTATT ACGCAAAATA TGGTGCTTTA
ACATTTGCTC TCATAGGTAT AGTTCTCCTT TTAATATTTG CTCAAAATGT GCCTGTACAG
TATGTGCACA TAAAGGACAT ATCTCAAACA TATAATTACG GCACTGTTGA GATAAAAGGT
ATAGTTTCTT CTGCACCATC CTTGATAGTT TATAAGGAGG GATCCGCTAC ACTTTACATA
GATGTGGATG ATGGCACTGG AATAATGAGC GTGCATGTGT ATAGTCCAAC TGTAGAAAAA
TTGGCAAAGG CGAATAAGCT CCCGGGATAT GGCGAGTATG TGGATGTCAT AGGAGAGGTG
TATATAAGGG GAAGCAACAT TTATATGATT GTTAACTCAC CGGAGGAGAT TAATATAATC
AAGCCAAAAC CCGTGCAGAT GAGTATAGCG GATATTAATA GTATAGAATA TCCTTATGCA
AAATATGTGA GGGTTGAGTT GAATGCAACC GTTCTAAAAG TTTATGAAAC TTCGAGGGGT
AGTTATGTCC TAAATATAAC TGATGGGACA GGTTATATGG ATATGTATCT TCCATATTCG
GTGGTGTATT TTAGCAATAT GGATGTAAAA TCTCTTGAAG GTAAGAAAAT AAATGTGGTG
GGTTCTATAG AATGGTATGG CAGTTTTATG AATGGCTATT GGGAACTCAT ACCAAGCGAC
ATTAATGATA TAAAGGTGAT AGGATGA
 
Protein sequence
MEDRYCPNCG RYVGSLEVCP YCGTKIPKHT GYYYAKYGAL TFALIGIVLL LIFAQNVPVQ 
YVHIKDISQT YNYGTVEIKG IVSSAPSLIV YKEGSATLYI DVDDGTGIMS VHVYSPTVEK
LAKANKLPGY GEYVDVIGEV YIRGSNIYMI VNSPEEINII KPKPVQMSIA DINSIEYPYA
KYVRVELNAT VLKVYETSRG SYVLNITDGT GYMDMYLPYS VVYFSNMDVK SLEGKKINVV
GSIEWYGSFM NGYWELIPSD INDIKVIG