| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0573 |
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| Symbol | |
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| ID | 8827518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aciduliprofundum boonei T469 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013926 |
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| Strand | + |
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| Start bp | 551954 |
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| End bp | 555208 |
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| Gene Length | 3255 bp |
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| Protein Length | 1084 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | |
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| Product | PKD domain containing protein |
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| Protein accession | YP_003482946 |
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| Protein GI | 289596250 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.179888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTTA GAATGGTGGA AACTGTCAAG ATAAAAGCGG TGGTAATTCT ATCAATCCTC
GTTATTGCTA TAGGCATTCC CGCCATATAT TATGCTTCAA CAGAAAGGCA ACCTACAAAC
AATCCTCCCG TGGCCATAAT AACCGCCCCG TCTAGGGGAT ATACGGATAC TCCCATAGAA
TTTTCCGCAG CTAATTCTAT TGATGATGGT TTTATTCTAA CTTACATTTG GGATTTTGGA
GACGGAACAA AATCTGCCGG TAAGATTGTG TATCACACTT ACAGAGAAGA GGGGAACTAT
ACCGTTACTT TGGTGGTATA TGATAATGAG GGAGCATACT CCTATGCAAA GAAAATGATC
ACCATTGAGA AAAAGCAAGT CAAGGAAATT AAGGTATCAG TTAATGAATT ATTAAAGAAT
GTTTCTGCTT ACATAGGTAA GGAAGTTGTT GTGGATGGTA TATTTGGATA TGGACGCAAT
TACAGTTTCT TCCTTGTAAA TAATTCAGGG TACAGAGGTA TAAGGGTTTA TGTAGAACCT
GGAGCTCAAA GGCCAGAAAC TATGCATTAT GGAGATATCT TGGAAGTTCG TGCAAGATTT
ACAGTTTATA GAAATGAATT CGAGTTGAAA GTTGAGAACA ATAGCAAGGA TTATGTGAAA
ATAATAGGGT CTGGTGGAAA GAACACTTAT GCTAATATAA CCCTTCAAAA TTGGCAAGAA
TACAACAATT CATTTATCCA TCTAACGGGT AAGGTAACAA AGGTTTATGC CTCTTATAGA
TATTCCATAG GTCCCTTAAC TGTTTACATA TCCTTCAATG CCAACCGTAC TGGGTCTCCT
GCAGTAGGGG ATGTTTTTGA AGTTCAAGGA TTTTTAACTT ATTATCGTTC TTACAAGTAC
AATGTGAGCT ATATGGAAAT TTATGTGCGC AACTCCACGG CTGATTTCTC CAAATATGTA
AAATCTACCT ATCAAAATGT GTCTATGAAC TCTTTGCTTG AAGAACCAGA TACTTACAAT
AACTCTGCCG TGCATATTCC ATCAGCATTT GTCATATCTT CCTACGCTTC TTGGAATTTT
GAGGTGAGCG ATAACATAAG CAATAATGCA TCTATGCATG TTTATGTTGA AAGAGGAGGT
ATTGTCAAGG GAATGATATT TAATGGCGCA AAGGTAGAAA TATGGGGAAA TTTAGTGCTC
TATCGTGGGC AGTGGGAGAT AAAAATTAGA AATGCTACAA CTGATAAGGT TTTAGTTTTG
AGCAAGCCAG AATATAAGAA TATATCCGTA GATAAACTCC TTGGAAATCC ACAAGTTTAC
AATGGAAGCA ATGTGCACTC TTGGGGAATA ATAAGTTGGT TATATCAGAA TGAGAGCTCT
CATTTTACCC TCTTCGGGCT TTTCTGGAAT GGAAGCGAGG TAAAAGTTGT AGGATTCAAT
GGTTCTAGTA TAGGGAGTAT TCAAGAGGGA TACTATGCAG ATGTTTATGG AGAATTCACC
TCTTATAGGG GAGAATGGGA GATTAAAATC AGGCCCAAGA GCTATGATTA TGTTGTGGCA
CATCCTCAAA GTTATAGAAC GACAAATATC ACTTCAATCC TTAAAGCTCC TGAAGATTAC
AACAACACTT TAGTTTATGT GCCTTATGCG AAGGTTAAAA ATGTGTTTGC AAACTGGCTT
TTCTGGGTTA GCAATAATGT TTCAAATCCT AATGATTTGT CAGTGTATGT TGAGCGTGGC
GGGATTGTAA ATGGCACTCC TTATTTCAAC GCTACAGTGG AAATATGGGG TATGGTCACG
CAGTACAATG GCTCATGGGA GCTGAAAATA AGAAACAATA CAGATGACAA AGTTGTTGTG
ATTAGCAACG CAACATATAA AGAGGTATCA ATAACCACGC TCTTGAGCTC ACCTTTTAAG
TATAACAATA CTTTGGTTTA TGTACCTGAG GCAACGGTGG TGAGTGTATA CAATGCCTCC
TGGCTATTCT GGATAAGTAA TTCCACAAAT TCCACCGAGG ATGTTAGCGT ATATGTGGAA
AAAGGAGCTC ATATAGATGC CCAGGTTTAT GTCGGAGCGA AGGTTGAAGT GTGGGGTATG
GTTACCCGAT TTAATGGGAA ATGGGAGATA AAGATAAGGG CAAACTCTGG GGATAATGTC
AAGCTCATAA CCCCAATTAG CAATTACACG GTGGTTAATA TAACAGAACT CTTGGAGAAT
ACAAGCGCTT ATAATGGTAC CCTTGTGGAA ATACCAAATG CCACGGTGGT AAATGTATAC
GCTTCTTGGT TATTCTGGGT AAGCAATTCC ACTGCGGATA TCAAGGATAT TGCAGTTTAT
GCTGAGAAAG GTGTGAAAGT CCCAACCTTG GGCAAAGGTG ATACTGTCAA GATTTATGGA
AATGTTACAT ATCATAATGG CTCATACGAG ATACTTTTGC GGACAGGTAC GCAAGATAAA
GTCGTGGTTT TGCATTCCTC CGCTAAATAT GTGAATCTGT CCTATTTGCA CGAGGTGGAT
AGCAATGGGA CTCTTATACA TCTAGGCGAG CAAGTTATCG TGAATGCAAC GGTTATTTCT
TCTCCAGGGG TATTTTCGTT CACCTCAAGC AGTGGAAAGC CCATACTGAA AATGTATGTG
GAAGATTCCA CGGGGGGTGT TTTGGTATTT GGTTATGATA TGGATTATGC AAAGTTGAAT
TTAACGGAAG GAGATATGGT ACAGATTAGG GGTACAATAG CGCAGTATAA TGGGGAAGCA
GAGCTTAAGA TATCATCTCT TAATTACATA ACTTATCTTA GAAAAGGGAC AGTACCAAGT
CCTCTGGTCA TACCTACTGG GTATTTCTCC AATTGGAGCG CTGCAGAGAA GGTTGAGGGC
ATGCTTGTAA AAGTTCACGG CACTGTCACA AGCGTAAACC AGAATTATGG ATATTTTTAT
CTGGATGATG GGAGCGGTGC AGTAGAGATA TATGCAAAAG CAGCAGGCAT AGATATTTCA
AATATTTCTC AGGGGGAGAA TCTAACGGTT ATAGGTGTAG TGTCTCAATA CGATAAGACA
TCGCCTTACA CCAGTTATTA TGAGATATTG CCTAGATATG CATCGGATAT AATGCAGAAT
AATACATCAT CGAAAGTTAG TGATAAAAAT TTTGTAGGAA ATTGGAAAGA TAGTGAATTT
GGTACATACT TGGAAGAGGT GTATGTATGG AGGATAGATA CTGTCCTAAT TGCGGCAGAT
ATGTGGGTTC ATTAG
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| Protein sequence | MKVRMVETVK IKAVVILSIL VIAIGIPAIY YASTERQPTN NPPVAIITAP SRGYTDTPIE
FSAANSIDDG FILTYIWDFG DGTKSAGKIV YHTYREEGNY TVTLVVYDNE GAYSYAKKMI
TIEKKQVKEI KVSVNELLKN VSAYIGKEVV VDGIFGYGRN YSFFLVNNSG YRGIRVYVEP
GAQRPETMHY GDILEVRARF TVYRNEFELK VENNSKDYVK IIGSGGKNTY ANITLQNWQE
YNNSFIHLTG KVTKVYASYR YSIGPLTVYI SFNANRTGSP AVGDVFEVQG FLTYYRSYKY
NVSYMEIYVR NSTADFSKYV KSTYQNVSMN SLLEEPDTYN NSAVHIPSAF VISSYASWNF
EVSDNISNNA SMHVYVERGG IVKGMIFNGA KVEIWGNLVL YRGQWEIKIR NATTDKVLVL
SKPEYKNISV DKLLGNPQVY NGSNVHSWGI ISWLYQNESS HFTLFGLFWN GSEVKVVGFN
GSSIGSIQEG YYADVYGEFT SYRGEWEIKI RPKSYDYVVA HPQSYRTTNI TSILKAPEDY
NNTLVYVPYA KVKNVFANWL FWVSNNVSNP NDLSVYVERG GIVNGTPYFN ATVEIWGMVT
QYNGSWELKI RNNTDDKVVV ISNATYKEVS ITTLLSSPFK YNNTLVYVPE ATVVSVYNAS
WLFWISNSTN STEDVSVYVE KGAHIDAQVY VGAKVEVWGM VTRFNGKWEI KIRANSGDNV
KLITPISNYT VVNITELLEN TSAYNGTLVE IPNATVVNVY ASWLFWVSNS TADIKDIAVY
AEKGVKVPTL GKGDTVKIYG NVTYHNGSYE ILLRTGTQDK VVVLHSSAKY VNLSYLHEVD
SNGTLIHLGE QVIVNATVIS SPGVFSFTSS SGKPILKMYV EDSTGGVLVF GYDMDYAKLN
LTEGDMVQIR GTIAQYNGEA ELKISSLNYI TYLRKGTVPS PLVIPTGYFS NWSAAEKVEG
MLVKVHGTVT SVNQNYGYFY LDDGSGAVEI YAKAAGIDIS NISQGENLTV IGVVSQYDKT
SPYTSYYEIL PRYASDIMQN NTSSKVSDKN FVGNWKDSEF GTYLEEVYVW RIDTVLIAAD
MWVH
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