| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0572 |
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| Symbol | |
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| ID | 8827517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aciduliprofundum boonei T469 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013926 |
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| Strand | + |
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| Start bp | 551063 |
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| End bp | 551932 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | |
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| Product | tRNA intron endonuclease |
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| Protein accession | YP_003482945 |
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| Protein GI | 289596249 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000000753451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA CAATTTGCAA CTCTCTTGCG GACAAGCTTT ATTCAAGAGG TTTTGGGAAT
AGAGATGGGA AATGCATAGA ACTCTCTTGG GTTGAGTTTG CATATCTCTC CGAGAAAGGA
ATTTTGGATT ACGATTTTGA AGATGTTGTT AAGAAAGCAT CTAGAGAAGT ACCAAATTTT
GATATTCTAT TCATCGTTTA CAGGGATTTG AGGGAGCGTG GCTATGTTTT GAAGGATAGG
GGCAATTATT TTATGGGCCG CAAGAACTAT TCAATGGCTT TTTACCCTCT TTCCGATATG
GATTATTTTG ATGTGAGTGA ATTTGTAGAG AAGCAATACC CCTTAATCCT ATCCATCGTG
GATTTTGATG GAGAAGTAAC CTATTATTTG GTTGATATGG TAGAGCCTAA GGGAACTTAT
TTCAAAATTC CCAAAGAAGA GCTGAATTTT GAGATTTATG GGAAAAGGGC TTTTGTTTTT
ACAAATTTGC AGGATTTTGA GAATTTGACA TATGGAAGGA ACGAGGGAAC ATGGGGGCAT
CTTAGCCTGC TTGAAATTAA ATACCTTGCG GAAAATGGGG TGGTGGGAAA AAATCCACAA
GTTGAAGGAG TTTATGATAT TTACAAGGAT TTGAGAAATA GGGGTTTGAT AGTAAAATCG
GGATTCAAAT ACGGCACTCA TTTTAGAGTT TATGAGAATA GTATGGAAGA GCATTCCAAG
TACCTCGTTC ATTTAATTTC CGAGAGAGAA GAGATTCAGA AGATAAGCCG TGCAGTTCGT
GTTGCCCATG GAGTTAGAAA AACTCTGCTT CTTGCACATA ATTTAAATGG GAAAATTGTT
TATTTCAGTG TATCTTGGAT CAGGCCTTAA
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| Protein sequence | MKRTICNSLA DKLYSRGFGN RDGKCIELSW VEFAYLSEKG ILDYDFEDVV KKASREVPNF
DILFIVYRDL RERGYVLKDR GNYFMGRKNY SMAFYPLSDM DYFDVSEFVE KQYPLILSIV
DFDGEVTYYL VDMVEPKGTY FKIPKEELNF EIYGKRAFVF TNLQDFENLT YGRNEGTWGH
LSLLEIKYLA ENGVVGKNPQ VEGVYDIYKD LRNRGLIVKS GFKYGTHFRV YENSMEEHSK
YLVHLISERE EIQKISRAVR VAHGVRKTLL LAHNLNGKIV YFSVSWIRP
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