Gene Aboo_0548 details

Gene Information

• Locus tag: Aboo_0548
• ID: 8827493
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: -
• Start bp: 530958
• End bp: 531650
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 40%
• Product: ribose 5-phosphate isomerase
• Protein accession: YP_003482921
• Protein GI: 289596225

Plasmid Coverage information

• Num covering plasmid clones: 57
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGCTAA AAGAAGAATT GAAAAGGAAG GCGGGAGAGA AAGCTGTGAA ATACATAAAA 
GACGGCATGG TTGTGGGCTT AGGAACTGGC TCTACTGTAA AATACACCAT TCTCAAACTC 
GGGGAGCTTG TAAAAGATGG CTTGGATATA ATAGGGATAC CCACATCAAT TGCAACAGAA 
AAACTTGCAA AGGAGATGGG AATAAAATTG GGAAGCATCA ACGATTACCA AGTCATTGAT 
TTGACAATAG ATGGAGCTGA TGAAGTTGAT AGAAATTTGA ATTTGATAAA GGGAGGGGGT 
GGCGCTCTTC TCAGGGAGAA GATGATTGCT CACGCTTCAA AATATGAAAT CATCGTGGTG 
GACGAGAGCA AAGTAAAAAG CGTTTTGGGA GATTTTCCCT TGCCAATAGA GATTGTAAAA 
TTCGGATACA AGAGAACAAT GAATGTTCTA TCAACCCTGG GCTGCAAACC CTTGCTTAGG 
GTGAAAAATG GGGAAGCGTA CATAACCGAC AACGGCAATT ATATCGTGGA TTGTAAATTT 
GAGAGAATTG ACGAGCCTGC AAAGCTGGAA AGAAGGATCG ATGAGATACC GGGAGTTGTA 
GAGGTAGGGC TATTCGTGGG CTTGGCAAAC AAAGTAATAG TTGGAAAAAA AGATAAAATA 
GAAATTATGA CAAGTTCTGG AGATTCTTTA TAA 

 

Protein sequence

MELKEELKRK AGEKAVKYIK DGMVVGLGTG STVKYTILKL GELVKDGLDI IGIPTSIATE 
KLAKEMGIKL GSINDYQVID LTIDGADEVD RNLNLIKGGG GALLREKMIA HASKYEIIVV 
DESKVKSVLG DFPLPIEIVK FGYKRTMNVL STLGCKPLLR VKNGEAYITD NGNYIVDCKF 
ERIDEPAKLE RRIDEIPGVV EVGLFVGLAN KVIVGKKDKI EIMTSSGDSL