Gene Aboo_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0540 
Symbol 
ID8827485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp524153 
End bp524668 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content33% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003482913 
Protein GI289596217 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.000936052 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAGAG AAGAAGGTGT TAGCCCGGTA ATCGCTGAAA TTCTTATGAT TGCTATTACA 
GTAGTTTTAG TTACTTCTCT TTATCTATTT GTAGTGGGTG GATACTTATC TACACCATAT
AATGTAGACC AGCTTCATGG TTATCTAACA TTCCAATCTA CCAAATCCAA CAAAACCACA
TTATATTTCT CTATCTCACT TAGTTCTCCA CAAAGCACAT ACATGGAAAA TGTGAAAATA
ACTATAGATA AAAGTGGTAA ATTATTGCAT TTAAATTATT TAAATAACTT CATTTGGAGC
AATAAAACTT CAAATGGCAA ATGGCACTAT GAGGCAAAGT TAATAGATAA CGATGATGAT
GGCAAATTTA GTAATGGAGA TACACTGATA GTTTATGTTG TGGATGATAA TCCTTCAGAT
AATATCACAC CTCCGCCGTT CCAGAGTGGA GATAAAGTTT TATTCTCAAT AAATGGTTAC
AATGGTGTAT CTTCTGGGGG AGTTATAAAC TTCTAA
 
Protein sequence
MRREEGVSPV IAEILMIAIT VVLVTSLYLF VVGGYLSTPY NVDQLHGYLT FQSTKSNKTT 
LYFSISLSSP QSTYMENVKI TIDKSGKLLH LNYLNNFIWS NKTSNGKWHY EAKLIDNDDD
GKFSNGDTLI VYVVDDNPSD NITPPPFQSG DKVLFSINGY NGVSSGGVIN F