Gene Aboo_0531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0531 
Symbol 
ID8827476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp515083 
End bp516168 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content36% 
IMG OID 
Productglycoside hydrolase family 57 
Protein accessionYP_003482904 
Protein GI289596208 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTCGC TAATATTTCA TGCAAACCTT CAATATGCAG AAATACCAAA AAAGGAAATA 
GAGAGAGTGA TAAACAAGTC TTACAAGCCA ACTATTGCGA CTCTTTTAAA AGAGGATATT
CCGTTTGCTC TCAATATCAC CGGGTTCTCC ATACAATACC TTCCTAAAGA GTTAATTAAG
GGAATAAAAG ACGGAATTGA GAGCAATTTG ATAGAAATAA CCGGTACTTC TTATTCTCAT
GCCATCTTGC CACTTCTTTC CCTAAACAGA GTAAAAGAGC AAATTGAGAT GGATGTGAGA
ATGAAAGAGG ATACGCTAGA GGTGAAGCCT ATCTCTTTCT GGCCTCCAGA GTTGGCCTAC
GATCCTATAC TTCCAGCAAT TCTTAAAGAT TTAAATTTTG AATACGTTTT TGTGGATGGG
GAAGCTCTTT TGTTTTCTAA CTATATGAAC ACAGCAATAA AAAATTTTGA AATCCCATAT
ATCAAATTAA TAAAAGCATC CTATGGCCAG AGAAAATATC TCAATTATTT TTTGGGATTG
CGTCAACTCA GAAGATCCTT ATCATATGTT TTTGGAGGAA AAGCCCTTGT TAAAGGTGTG
AAAAACATTG TGGGAATACC CGTGTGGCAA CCTGTAAACA TAACACTTAT GCTCTCACTT
GGGCATTTTC CATTTATGAA CGAGAGAAAA GCCGCTAGAT GGTTAAGTTC CATACGAGAT
ATCATGCTAT ATGGCACAGA TATTGAGTTC TTTGGGTATA TGCCATTTGC AGGTAAGAAA
ATTAAAATAA GTACCCTAAT TAAATTTATA AAAAGTAACA ATATAAACAT TACACTCCCA
TCACAATTGC CTATGAGTGG GAGAGAATTT TACCTAAAAA CATCTTCTTG GGCCCCTGAT
AAATCACTGC TCATATGGAA AGAAGATGAA GATAACAGAA GATTGAATAT GCTTATTTCA
GGTATAAAAG GAGATAACGC GTTCATGGCT GAGAATAGTG ATGCCCGTGG ATGGGAGCCT
TTGCCAGAAA GAAGATTAGA TGCTTTTAAA GCCATATATG AGGAATGGAG GAAGGAATAT
GAATAA
 
Protein sequence
MHSLIFHANL QYAEIPKKEI ERVINKSYKP TIATLLKEDI PFALNITGFS IQYLPKELIK 
GIKDGIESNL IEITGTSYSH AILPLLSLNR VKEQIEMDVR MKEDTLEVKP ISFWPPELAY
DPILPAILKD LNFEYVFVDG EALLFSNYMN TAIKNFEIPY IKLIKASYGQ RKYLNYFLGL
RQLRRSLSYV FGGKALVKGV KNIVGIPVWQ PVNITLMLSL GHFPFMNERK AARWLSSIRD
IMLYGTDIEF FGYMPFAGKK IKISTLIKFI KSNNINITLP SQLPMSGREF YLKTSSWAPD
KSLLIWKEDE DNRRLNMLIS GIKGDNAFMA ENSDARGWEP LPERRLDAFK AIYEEWRKEY
E