Gene Aboo_0523 details

Gene Information

• Locus tag: Aboo_0523
• ID: 8827468
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: -
• Start bp: 506466
• End bp: 507179
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 43%
• Product: thymidylate synthase, flavin-dependent
• Protein accession: YP_003482896
• Protein GI: 289596200

Plasmid Coverage information

• Num covering plasmid clones: 63
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGACTCC CACTCACCCC TCGTAGGAAA ACAATTAAAT CCAAAACACA ATTACTCGCC 
ATGAAAACTT GCGGGGGTTC CCAATGCCTC AATGTTGAAC TTATTGCCTA CTCGGTGCCA 
AGGGAGGGGA ATGTAGATAA ACTGATAGCG GAGAGCGCTG CCATATCCCA CGCTCCAGAG 
TTCAGAACAT TAAATGAAAA AAGAGTCGAG CATTTGGTCA ATCTCTTGAA AAGATTGGGG 
CACGAAAGTG TTTTTGAGCA TGCCTGTTTC ACCTTCCGTG TTGAAGGAAT CTCTCGTGTA 
TGCTCTCACC AGCTTGTCAG ACATAGATTG GCAAGCTATA CACAGCAGAG CCAAAGGTAT 
GTAAATTTGA AAGCTCCAAA ATTCATTGTG CCAGAGGCAA TTTACGGTAG TGAATTTGAA 
GATGAATTTA TGGAAATTTT AGAGAGAGCG GCAGAGCTTT ATCGCAAAAT GGTAGAAGGA 
GGCATAAGAA AAGAAGATGC CAGATTCATT CTTCCCCAGG GAATAGAGAC GAAGATAATC 
ATAACAATGA ATGCTAGGGA ATTAAGACAT TTCATATCCC TCCGGTGCGA TCCAAGTGCC 
CAGTGGGAAA TAAGGGCCAT GGCTAAAGAG ATGCTCAAAT TAGCCTACGA GAAAGCTCCG 
ATTTTATTTG GGGACCTGTA CAATAAGTAT ATAGAGGACA AAACTGACCA GTAA 

 

Protein sequence

MGLPLTPRRK TIKSKTQLLA MKTCGGSQCL NVELIAYSVP REGNVDKLIA ESAAISHAPE 
FRTLNEKRVE HLVNLLKRLG HESVFEHACF TFRVEGISRV CSHQLVRHRL ASYTQQSQRY 
VNLKAPKFIV PEAIYGSEFE DEFMEILERA AELYRKMVEG GIRKEDARFI LPQGIETKII 
ITMNARELRH FISLRCDPSA QWEIRAMAKE MLKLAYEKAP ILFGDLYNKY IEDKTDQ