Gene Aboo_0497 details

Gene Information

• Locus tag: Aboo_0497
• ID: 8827442
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: -
• Start bp: 482221
• End bp: 485766
• Gene Length: 3546 bp
• Protein Length: 1181 aa
• Translation table: 11
• GC content: 36%
• Product: multi-sensor signal transduction histidine kinase
• Protein accession: YP_003482870
• Protein GI: 289596174

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAAAG ATTTAATTCC TGATTCACCG AATATGGGAA TTATAGCTAT AGATGAGAAT 
TTGGATATTT TAAAGTATAA TGAGGTGGCA AAAGAGCTCA TACCTGATAT TTCAATTGGA 
GATAATTTCT TAGATTATGT GGAAAATGCA AATGAATTAA ATAAAGGCCT TAAGGACTTA 
ATTTCTGGAG AGATAGAGAG CTTAAATAAA TCCATTAATT TGAAAAATTC CAAATCCTCT 
GAAATTTACG CATTTTGTGT TAAAGGAATA GTATTTATTC AGATGAGGGG TGCACAATCC 
CAGAAGGATG AAATAAAGGG TCATTCTAAC ATACTTAAAT TGATTTATGA CTTCGTATTA 
AATACTGCAA AATTAAGGAG AAAGGAAGAT TTCTTTATGG AAACATACAA AAATCTAAAA 
AAACTCTTGA AATTCAATTC TTTTGCAATA TCGCTAGTAA ATAAAGATAA AAAGAGTTTT 
ACAGTGGTAT TTAGCTATGA GGAGGGAAAG AGACTACCAA AGAGGACATA CAATTTGGAC 
CCACATGGAA GTTTAACTGG TTGGGTGATA TACAATAAAA AGATGCTTTA CATAAAAAAT 
GTGAAAAAAG AGAAGTTACC CTCTAAAACA CACCAAGTAG GACATACCAT ATCCTCTTGG 
CTGGGTATCC CCTTAATTCA CAGGGGAGAA GTTCTGGGAG CTTTAGTTAT CTGTGGATTT 
GAGCCTGAAG CATTCAATAA GGACGATGTA AAACTTCTCA AAACTCTGGC AGCTTATATA 
TCGCTCATCC TAAAAAATGT TCTTTTGTAT GAGGAGATTA AAGAAAACAG AGATATGCTA 
GAGAATATAA TTAACTCGTC TCTCATAGGC ATCGTTATAA ATGATTTGAA TGAAAATATC 
TTGTTCACCA ACAAGAGATT TGCAGAACTC CTAGGCTATT CTCCACAAGA ATTAATTGGA 
AAAAATATAA AATTGATAAC CACCCCAAAA AGCTTCAAAG AGATTAAGGA GAGAACTAAG 
AGAAGATTAA AAGGTTTAAG TGATTTATAT GAAACCCAGC TAGTAAGAAA GGATGGAAAG 
ATAATTGATG TAATTGTAAG CGCTTCCCCT CTCAGAGATT CTTCAGGCAA AATCACAAGC 
TCCATAGGAA TAATAGGTGA TATTTCTGAG AGGAAAATGT GGGAAAATGA AATAAGGAGA 
CACAACAAAC TGCTCTCTTC CTTGTATCGC ATATCTCTAA AAATGGGCGG ATTCCCAGAA 
CCAAGGGAAA TGTTCGAAAT CATATACAAT GAGCTTAAAA ATGTATTTAA CTTTCACTGG 
CTAGCGATAA GCTTCTACGA TAAAGACAAG GATATTATCT CTTTTCAAAT GATAAAATCT 
GAGGAGAAAG AAATTGAAAA TTTCACTGTA AAATGCGATC CTGCAACCTC CATAACTGCA 
AGAGTTATAA AAACTAAAGG GCCATTTATT ACAGGAAACA TACTTCGTGA TTTAAGTCCT 
GATTCTTATC AAATTGCTGG CCCTCCAGAT GTTGTGGATT TCTCCAATGT TATTGTGCCC 
ATAATCTATG AAAATGACGT GCTTGGTACT ATAGGCATGG CTGCTAAGGA AAAGAATGCC 
TACGATGAGT ACACTGTAGA ATATTTACGC ACCCTTGCTA GCTCTCTGGG AATTTTCATA 
GCAAATTACA ATCTATACAA GGAGATTAAG AGAACTAAAG AAACCCTTGA AAACTTGATA 
AATACAACCT TGGTCGGCAT TATAATAGAG GATATGAATG GTAAGTTGAG CTTTGTGAAT 
GATAGATTTG CAAAAATGCT TGGTTACAAT GTTGAGGACC TATTAGGAAA AAGGATTGAG 
GGCTTTGCAA CTCCCGAATC AAGGGAGGTT ATGCTTAAAA AAGGTAAATT AAGGAGGATG 
GGAATAAGTG ACTCTTACGA GGCACAATTT GTTAAGAACA ATGGAGAGAT AGTGGATGTT 
CTAATAAACG CCTCTCCCCT CAAAGATGAA AATGGAAAAT TGCTGGGAAT AGTGGGGGTG 
ATTTCCGACA TAACTGAAAG GAAGAATCTA GAAAGAAAAA TAAGGGAAGA ATGGGAAAAG 
TACAAAACAT TGATGGAAAA CTTGCTTGTG GGAATAGTAA TTGTGCGGGA TGGAAAAGTC 
ATCTTTGCCA ATAATGTGAT TGCAGATTTA TTGAAATACA AGAGAGAAGA GGCCATAGGT 
GAGAACTTTC TCAAGTTCAT ACATCCAGAT ATGCGAGATT ATTTGTGGGA TTTGTATCAG 
CGCAGATTGA AGGGACTCTC TGCTCCCAAT TCATACATAG TGAAATTCGT AGATTCTCAA 
GGAAATCCAG TATGGACCAT AATTAGAAGC TCTGTGATTG ATTGGGAGGG TGAGAGGGCA 
GTTATAGTGA GCATACAGGA TATAACCCGC ATAAAAAATA TGGAAGAAAA GCTCTTGGCT 
TTAGTTAAAA CCTTTGAAAA AATCAAGCTT TCTCATAGCA AAGATGAAAT TTACGAGCTT 
GCCATAAACG CCCTTACTTC AATCCTGAAT TTAAAAATAG TGGTAATAGC AGAAGTTTCA 
GGGAATAAAA TTATTCCTGC CAAGTGGAAG GGTGTTACTC CCCCACAATC CATGGATTTA 
TACTCCAAGA ATAGCATCGT TGGTTGGGTT ACAAAAAATA ATAAGCCCTA TTATACCCCT 
GATGCTTCGA AAGATCCATT ATACCTTAGA GTAAATCCGG AGACAAAGAG TAAATACGCA 
ACTCCCATAT CTTCAAATCA TACCTTCTTT GGTATTTTAA ATGTAGAGAG TGATAAGATT 
GATGGTATAT CTGAGGATGA TAGATTGCTT ATAGATTTGA TGGCTTCTCA CATAGCCGTT 
GCCATAGCTG GATTAAAGTA TCATAAAGAA TTAGAAGATG CAAAGAATCT GCAAGAGCTC 
ATGCTTCACA TTGTAAGCCA TGATTTGAAA AATCCACTTG CCGTGCTCCA TGGGTATTTA 
GAATTGATGA ATGAAGAGGG CCCTAACGAA TACATACCAA CCATGATAAA AGCCGTTCAA 
GAAGCAGAAG ATATAATTGA GAAGGCAAGG TTGTTCTCAC GGTTAGGAAA CAAGAAAATT 
GATATGAAAA AAGAGATTAT GAACTTAAAG GAGCTAATTG AAGATTCCGT TGAACTAATA 
AAACAGAAGT ATTCGCAGGG AAAAATAATA CTAAATGTTC CTTCATACCA CATTCAAGCT 
CTACCAATCA TCAAAGAAGT TTTTGTAAAT ATTTTGGACA ATGCTTTTAA ATATGGGGCA 
TCAAAAGTTA CGATTGCGGG CAAAATTTTT GAGGGCTCTA TGGAAATAAG AATAGCCGAT 
GATGGTCCTG GAATACCCGT GAGCAAGAGG GATATAATTT TCAAGCCCTT TGAAAGATTG 
GCATCGGGAA AGGGCTCTGG ATTGGGATTG GCTATTGTAA AAATGATAAT GGAGCTTCAT 
AAAGGAGAGG TAAAAATAGA AAATAATGTG CCCAAGGGCA CAGTGTTTAT TTTGCGTTTC 
CCATAA 

 

Protein sequence

MDKDLIPDSP NMGIIAIDEN LDILKYNEVA KELIPDISIG DNFLDYVENA NELNKGLKDL 
ISGEIESLNK SINLKNSKSS EIYAFCVKGI VFIQMRGAQS QKDEIKGHSN ILKLIYDFVL 
NTAKLRRKED FFMETYKNLK KLLKFNSFAI SLVNKDKKSF TVVFSYEEGK RLPKRTYNLD 
PHGSLTGWVI YNKKMLYIKN VKKEKLPSKT HQVGHTISSW LGIPLIHRGE VLGALVICGF 
EPEAFNKDDV KLLKTLAAYI SLILKNVLLY EEIKENRDML ENIINSSLIG IVINDLNENI 
LFTNKRFAEL LGYSPQELIG KNIKLITTPK SFKEIKERTK RRLKGLSDLY ETQLVRKDGK 
IIDVIVSASP LRDSSGKITS SIGIIGDISE RKMWENEIRR HNKLLSSLYR ISLKMGGFPE 
PREMFEIIYN ELKNVFNFHW LAISFYDKDK DIISFQMIKS EEKEIENFTV KCDPATSITA 
RVIKTKGPFI TGNILRDLSP DSYQIAGPPD VVDFSNVIVP IIYENDVLGT IGMAAKEKNA 
YDEYTVEYLR TLASSLGIFI ANYNLYKEIK RTKETLENLI NTTLVGIIIE DMNGKLSFVN 
DRFAKMLGYN VEDLLGKRIE GFATPESREV MLKKGKLRRM GISDSYEAQF VKNNGEIVDV 
LINASPLKDE NGKLLGIVGV ISDITERKNL ERKIREEWEK YKTLMENLLV GIVIVRDGKV 
IFANNVIADL LKYKREEAIG ENFLKFIHPD MRDYLWDLYQ RRLKGLSAPN SYIVKFVDSQ 
GNPVWTIIRS SVIDWEGERA VIVSIQDITR IKNMEEKLLA LVKTFEKIKL SHSKDEIYEL 
AINALTSILN LKIVVIAEVS GNKIIPAKWK GVTPPQSMDL YSKNSIVGWV TKNNKPYYTP 
DASKDPLYLR VNPETKSKYA TPISSNHTFF GILNVESDKI DGISEDDRLL IDLMASHIAV 
AIAGLKYHKE LEDAKNLQEL MLHIVSHDLK NPLAVLHGYL ELMNEEGPNE YIPTMIKAVQ 
EAEDIIEKAR LFSRLGNKKI DMKKEIMNLK ELIEDSVELI KQKYSQGKII LNVPSYHIQA 
LPIIKEVFVN ILDNAFKYGA SKVTIAGKIF EGSMEIRIAD DGPGIPVSKR DIIFKPFERL 
ASGKGSGLGL AIVKMIMELH KGEVKIENNV PKGTVFILRF P