Gene Aboo_0481 details

Gene Information

• Locus tag: Aboo_0481
• ID: 8827426
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 471608
• End bp: 472255
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 39%
• Product: ribulose-phosphate 3-epimerase
• Protein accession: YP_003482854
• Protein GI: 289596158

Plasmid Coverage information

• Num covering plasmid clones: 45
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTAAGG TATCACCTTC AATACTATCA GCAGATTTCT CAAGATTGTG CGATGAGATA 
AAATTCTGTG AGAAGGGCGG AGCTGACATG CTTCATCTTG ATATCATGGA CGGACATTTT 
GTGCCTAACA TAACATTTGG GCCAGTGGTA ATAAAGAGTA TAAGAAAATG CACAAAGTTG 
CCCTTTGATG CTCACCTTAT GATCGAGCGT CCAGACAAGT TTGTAAAGGA CTTTGTTAAT 
GCTGGCAGTG ATATAATTAC AGTGCACAGA GAAATAAAAA TATCAATAAA AAATGTGCTT 
AGAAAAATTC ATAATTATGG GGCAGAGGCG GGCATAGCTA TAAATCCTGA AACACCATTT 
GAGAAGGTAA AAGAGCACTT GGAGGATGTT GAATACCTTT TGATAATGAG TGTGCATCCC 
GGATTTGCAG GTCAGAGTTT TATAGAGGAT ACTTTAGAGA AGATAAAAGA GGCAAGGAAG 
TATATAGATG AGGAGGGCTT AGAGGTGCAA ATAGCTGTGG ATGGGGGTGT GAAGCACCAC 
AATGCAAAAA GAATAGTGGA TGCTGGAGCA GATATTCTCG TTGCTGCAAG TGCTATATTC 
AATGGAAATG TGGAAAGCAA TATAAAGAAG ATGAAAGCAA TCAAATAA 

 

Protein sequence

MVKVSPSILS ADFSRLCDEI KFCEKGGADM LHLDIMDGHF VPNITFGPVV IKSIRKCTKL 
PFDAHLMIER PDKFVKDFVN AGSDIITVHR EIKISIKNVL RKIHNYGAEA GIAINPETPF 
EKVKEHLEDV EYLLIMSVHP GFAGQSFIED TLEKIKEARK YIDEEGLEVQ IAVDGGVKHH 
NAKRIVDAGA DILVAASAIF NGNVESNIKK MKAIK