Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_0419 |
Symbol | |
ID | 8827362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | - |
Start bp | 416101 |
End bp | 417042 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | |
Product | TrkA-N domain protein |
Protein accession | YP_003482792 |
Protein GI | 289596096 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTCCT CATTCCCTCT CAAGAACCGG CTGATTTTGT TCATTCTTAT GGTTCTATCC ACCATAATGA TTGGGAGTTT GGGGTATGTA CTAATAAAAA TTTTCGTTGA ACATGAGAGC GTTACATTTA CAGATGCAAT ATATTTTAGC GTTGTTACAA TTTCCACTCT GGGATATTAT CCATCAGGTG TGAGTTTACA TAGCGAGATT GGTAAATGGT TCACAATATT TTATTTGATA TTTGGTCTTG GTGTGATTTT CGGAGGTATA CAAGCGCTTT TAGGTCCCTG GATAGAGTTA AAAGTTAAGA ATGCTGTGCA AGATAAAAAA ATGCCTGTGC CCCAAGATGC CCATGTAATA ATAGCTGGTT ATAACGATGT GGCAGACATT ATAATGGATG AATTGGACTT TTTGGACATA CCATTTGTTA TTGTTGATGA GAATGCTCCA GTAGATAAAC CATCTGTAAA TGGAAAGCCA ACAGAGATGG AGAATTTAAT CAAGGCAAAT ATTGGGAGGG CAAAGGCCCT AGTGGCTATA GGGGATAATG AAATGAATGC AGTTACGGTA ATAACTGGGA GAAAATTGAA TGACAAACTT AATATAATTG CTCTCTCTCA CAAGGATAGC GCCAAGGACA TTCTCAAAAA ATGCGGTGCA AATGTTGTTG TTTCTAGGGA TGAATTAATA GGTTCTGTTC TCTCTCACTG GATAAAAAAT GATTTTGTAC ATAAATTTGC AGGTGAAATT TTCAAGGATA TGGTTCTGGA AGAGCAAAAA GTTGATAAGT GCGCAGGCAA GAGCATAATG GAGCTCAATA TGCGGGAGAA AAAGGGTTTG ATAATAGGGA TATACAGGGA CGGGCAGTTG CTGGTAAACC CACAACCGGA GATGATACTG AAAAAGGGGG ATATTCTTCT AGTGTTTAAA GGGGGTGTCT AA
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Protein sequence | MISSFPLKNR LILFILMVLS TIMIGSLGYV LIKIFVEHES VTFTDAIYFS VVTISTLGYY PSGVSLHSEI GKWFTIFYLI FGLGVIFGGI QALLGPWIEL KVKNAVQDKK MPVPQDAHVI IAGYNDVADI IMDELDFLDI PFVIVDENAP VDKPSVNGKP TEMENLIKAN IGRAKALVAI GDNEMNAVTV ITGRKLNDKL NIIALSHKDS AKDILKKCGA NVVVSRDELI GSVLSHWIKN DFVHKFAGEI FKDMVLEEQK VDKCAGKSIM ELNMREKKGL IIGIYRDGQL LVNPQPEMIL KKGDILLVFK GGV
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