Gene Aboo_0418 details

Gene Information

• Locus tag: Aboo_0418
• ID: 8827361
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: -
• Start bp: 415480
• End bp: 416100
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 36%
• Product: TrkA-N domain protein
• Protein accession: YP_003482791
• Protein GI: 289596095

Plasmid Coverage information

• Num covering plasmid clones: 49
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCTTATCT GCGGGTATAA CTCAATAACT AAACTATTGG GGGGAAAGAT AATAGATGAA 
AATGCGGAGG GTAAGAATAG TATCAAGGGC AATCCTGCAG ACCCCCAGAT TCTCATAAAA 
GCTGGAATAA AGAAAGAGGA TACCATAATA ATCGCTATGG ATAGTGATGA AAAGAATATT 
TATGTTACAC TATTAGCTAG AGAATTAAAC CCAAAGATAA AGATTGCAGT CGTTGTAAAG 
AAAAAAGAAA GTGTGAGTAA GGTGTACGGT GCAGGAGCCG ATTATGTGGT CCTAGAGAGT 
GAGATAGTGG GTAAAGAGAT TCTAAGGTAT TTACTGGCTC CAAAAGTGGC ATCTTTTATT 
GAAAGGGTTA TTGTCTCAGA GGAGCTTCAA TTGATAGGAT TGAAATTACC CAAGGTTTAT 
GTAGGTAAGA AAATCAAGGA TACTGACATA AGGAAGAAAA TAGGATTAAT TATAGCCATA 
AAAAGAGGAA ATGATCTGAT AAAAAATCCT GCTCCTGACA CGATTTTAAA TGAGGGAGAT 
ATTCTCATAT TCCTTTTGCA GGGAAAAGAG ATAAATAAGA TAAGGGGAAT AATGGGGCAA 
TGGATTTTAC AGAAGGGTTA G 

 

Protein sequence

MLICGYNSIT KLLGGKIIDE NAEGKNSIKG NPADPQILIK AGIKKEDTII IAMDSDEKNI 
YVTLLARELN PKIKIAVVVK KKESVSKVYG AGADYVVLES EIVGKEILRY LLAPKVASFI 
ERVIVSEELQ LIGLKLPKVY VGKKIKDTDI RKKIGLIIAI KRGNDLIKNP APDTILNEGD 
ILIFLLQGKE INKIRGIMGQ WILQKG