Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_0407 |
Symbol | |
ID | 8827350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | + |
Start bp | 406123 |
End bp | 407709 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_003482780 |
Protein GI | 289596084 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00229954 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATGA ATAAGACAAC AGGATGGATT ATAGCCATAG TTATTGTAGT GATTTTAATA ATAGCTGGAG TTGCAGTGTA CTTTGGCACA CAGCCCTCTT CACAGCCCAA ACCAGTTCAA AAAGAGCAAT TGGTAATTGG TGTAACAGAT AAAGTTTCTG ACATAGACCC AGCAAATGCT TACGACTTCT ATACTTGGGA AGTTTTGAAC AATATAATGA ATGGTTTGGT GACATACAAA CCAGGAACCA CAGATATAGA ACCGGCAATA GCTGCAAGTT GGGATGTAAA TTCTAACGCA AGTGTGTGGA CATTCCATCT CAGGCATGAT GTAAAGTATC CAAATGGAAC AGTCCTGAAA GCACAGGATG TTGTTTGGAG TATTGAGAGG GTTATGAGAA TAAACGGTGA CCCTGCATGG CTAGTTACCT CATTTGTCAA AAAGGTTACT GCTCCCGATG ATTTCACCGT TGTATTCACT TTAAAGCACC CAACAGCTTA CTTCCTAGCT CTTCTGACAG ACCCACCATA TTTCCCGGTA AGTAGAGCAT ACGATCCAAA CCACATACAG AGCGATCAAA CTGCTGGAGG CGCTGGACCG TACTACATAA CCAAGTGGGT AAGAGATCAA GAGCTTGACC TGCAAGCAAA TCCATATTAC TACGGGCCTC AACCAAAGAT AAAGAAGATA ATTATCAAAT TCTACAAAGA TGCAACTACA ATGAGACTCG CCTTGGAAAA TGGAGAGATC AATATCGCTT GGAGAACTCT TAGGCCCACA GATATAAAGA GCCTTAAGGA AGAGGGCAAG TACAATGTTG TTGAGATACC AAGCTCTTAC ATTAGATACA TTTGTATGAA CACCGTGAAA GGTCCAACTA AGGATGTGCG TGTTAGACAG GCATTGGCAT ATGCTGTGGA TAGACAACAG ATTGCAGAGA GAGTGTTCCA AGGAACTGTG GAGCCTTTAT ACACATTGAT ACCCATTGGA ATGTGGTCCC ACAAGGATGT GTTCAAGGAG AAATACGGTG CTTCTCCAAA TCTAAATGCA GCCAAGCAAT TACTCCAAGA GGCTGGTTAT AGCACAACAA ACAAATTGAA GATTGATCTT TGGTACACAC CTTCTCATTA TGGAGATACT GAGGCAGATT TGGCCCAGCT TCTTAAGCAG CAGTGGGAAG CTACCGGTAT GATTGAAGTA AACATAAAGA GTGCTGAATG GCAAACATAT CTACAATATG CAAGAACTGG ATCAATGGAA GTATACATGT TCGGATGGTA TCCAGATTAC CTTGATCCAG ATGATTACAC CACCCCATTC TTGTCCTCCG TGGATAATGC AAATGGATGG GCTGGAACTG GATACAACAG CAGTCAGATG AACCAAATAC TCTCAGAGGC ACAACAACTG ACTAACAAGA CACAGAGAGA AAAATTATAC ATACAGGCAC AAGAGCTCCT TGCACAGGAT GTGCCCTATA TACCAATAAT ACAAGGCAAG CTATATGTGG TAGCACAGAA AGATATCGGT GGAATAATCA TTGGTCCAGA TATGATTTTC CACTATAACT ATCTATACTT CAAATGA
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Protein sequence | MAMNKTTGWI IAIVIVVILI IAGVAVYFGT QPSSQPKPVQ KEQLVIGVTD KVSDIDPANA YDFYTWEVLN NIMNGLVTYK PGTTDIEPAI AASWDVNSNA SVWTFHLRHD VKYPNGTVLK AQDVVWSIER VMRINGDPAW LVTSFVKKVT APDDFTVVFT LKHPTAYFLA LLTDPPYFPV SRAYDPNHIQ SDQTAGGAGP YYITKWVRDQ ELDLQANPYY YGPQPKIKKI IIKFYKDATT MRLALENGEI NIAWRTLRPT DIKSLKEEGK YNVVEIPSSY IRYICMNTVK GPTKDVRVRQ ALAYAVDRQQ IAERVFQGTV EPLYTLIPIG MWSHKDVFKE KYGASPNLNA AKQLLQEAGY STTNKLKIDL WYTPSHYGDT EADLAQLLKQ QWEATGMIEV NIKSAEWQTY LQYARTGSME VYMFGWYPDY LDPDDYTTPF LSSVDNANGW AGTGYNSSQM NQILSEAQQL TNKTQREKLY IQAQELLAQD VPYIPIIQGK LYVVAQKDIG GIIIGPDMIF HYNYLYFK
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