Gene Aboo_0400 details

Gene Information

• Locus tag: Aboo_0400
• ID: 8827342
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 396968
• End bp: 397633
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 39%
• Product: ERCC4 domain protein
• Protein accession: YP_003482773
• Protein GI: 289596077

Plasmid Coverage information

• Num covering plasmid clones: 59
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATAT TTGTGGATTA TAGGGAGCGC TCAGTTCTTG ATATCATAGA GGATATTTTT 
GACTCATTTG AACTCGTAAA TCTCCCAGTC GGTGATTTTC TAATCACATT TGATACCTAT 
GCAGTGCTCG TGGAGAGAAA AAGTGCTTCA GATTTCTTGA ATAGTTTAAA GAGCAACCGC 
CTCTGGGACC AGATGAGAAG GATGCTGGCT CAAGAGGTTA TGGGTCATAA GATAAGAAGA 
AGGGCCCTGC TTATCCACGG TTATATGGGA GATGAAATAT CCTTATCCTC TTTTGGATGG 
AACCATATAA TGGGTGCATA TATGGAAATT CAATACAGAT ACGATATTCC CATATTCCAC 
GCGGAAGATG ATGATGCCCT AGCAGAATTT TTCAGAATTT TGATAAAGAG AGAAACGGAA 
GGAAAGAATG AAGGGGAGTT TGAGAGAAAA TGGATGAGAA TTCCACCAAA GAGAGTTATG 
AGCGATGAAG AGTGGAAAAT TTATGCTCTT TCTTCACTTC CATACATAGG AGAGAAAATC 
GCCAAGGCTC TTTTAGAGCA TTTTGGGAGC ATTGAGAAAA TTGCTAGGGC AAATATAGTT 
GAGCTTAAGA AAGTTGAAGG TATAGGGGAC AAGAAGGCAA GGCAGATATA TCGCATATTT 
CACTGA 

 

Protein sequence

MKIFVDYRER SVLDIIEDIF DSFELVNLPV GDFLITFDTY AVLVERKSAS DFLNSLKSNR 
LWDQMRRMLA QEVMGHKIRR RALLIHGYMG DEISLSSFGW NHIMGAYMEI QYRYDIPIFH 
AEDDDALAEF FRILIKRETE GKNEGEFERK WMRIPPKRVM SDEEWKIYAL SSLPYIGEKI 
AKALLEHFGS IEKIARANIV ELKKVEGIGD KKARQIYRIF H