| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0399 |
|---|
| Symbol | |
|---|
| ID | 8827341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | + |
|---|
| Start bp | 395177 |
|---|
| End bp | 396937 |
|---|
| Gene Length | 1761 bp |
|---|
| Protein Length | 586 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003482772 |
|---|
| Protein GI | 289596076 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATATTG CAGTTGTTTT GCAGGATAGA TGTCAGTTTA AAAAATGTAA TTACGAGTGC
CGTCTTTATT GCCCACCGGT TAGAATGGGT ATAGATACGG TTGTTATAAC AGAAAAGGGA
TATCCAAAAA TTATAGAAGA ACTGTGCGAA GGATGCGGGA TATGCGTTCA CAAATGCCCA
TTTGAAGCCG TGAAGATAGT TGGATTGCCA GAGGAATTAA AAGAAGAGCT CGTGCATCAG
TACGGGGAGA ATGGCTTTCG ACTTTACAGA TTACCACAGA TCAAGCAAGG AAAGGTTGTT
GGTATCCTTG GCCCAAATGG GGTGGGAAAG ACAACGAGCT TGAACATCCT CTCAGGAAAT
TTAATTCCAA ATTTGGGAAA TTACGAGAAA AAGCCATCTT GGGACGATGT GATTGATTAC
TTCTCCGGTA ATGTTATGGC TGATTACTTC TCAAAGTTGA GAGATGGAGA AATAAAAACA
GCTTTAAAGC CACAGTATGT GGATAAAATC CCAAGGGTTT TTAAAGGTAA AGTCAAAGAA
CTATTAAAGA ATGTAAACGA AGATATAAGC GAGGTTGCAT CCCTTTTGAA AATTGAGAAC
ATATTAGATA GAGATGTGGA TAAGCTTAGC GGTGGAGAAT TGCAAAGTGT AGCAATAGCA
GCAACCATGC TAAAAGATGC AGATGTTTAT TTCTTTGATG AGCCAAGCAG CTATTTGGAT
ATAGATCAAA GATTGGAAAT CGCAAGGATA ATAAAGGATT TGGCTGAGAA AAAGATAGTT
TTCGTGGTTG AGCACGATTT AGCTGTTATG GATTTCATAG CAGATGTGGT TCATATTTTA
TATGGAAGCG AAGGAGCTTA TGGGGTTGTT TCTCAAATCC GAGCCACAAG AAACGCAATA
AATTCATTCC TTGAAGGGTA TTTGAGAGAG GAGAACATAA GGTTCAGGCC TTGGAAAATA
GAATTCACAG AGCATCCTCC AAAGAGAAGC TTGGAGTTGC CCACATTGAT AAAATGGCCA
TACATAGAGA AAAAATATGA AAATTTCAAA TTAGAAGTTG AACCGGGAGA GATAAAAATA
GGAGAGGTTG TGGGCGTGGT TGGCCCTAAT GCCACAGGAA AGACAACATT CGTGAAAATT
CTTGCGGGAG TAATAAAAGC GGATAGGGGA GAAATAAATG AGGAAGTAAA AGTAAGCTAC
AAACCGCAGT ACATAAAGCC TCAGTACGAT GGCACAGTGG AAGAATTGCT TATGTTCACC
TTCAAAGATA GAATGTCCAA TTCATTCTTT CTATCCGAAG TAATCAATCC TCTGGGAATT
AAGCATATGT ACAACAAGGA TGTAAACGCA TTATCTGGGG GAGAGATGCA ACGCTTAGCA
ATAGCAATCT GCCTTGGGTT AGAAGCGGAT TTATATCTCC TTGACGAGCC CTCAGCATAT
TTGGATAGCA ATCAAAGAAT GATTGCGGCG AAGGTGATTC GCAGGGTTAT GGAAAACACC
GGCAAAAGTG CTCTCGTTGT AGACCATGAT GTTTATTTCA TTGACATTGT GTCGGATGAT
GTGATGGTTT TCGGTGGAGA GCCAGCAAGG CATGGCATTG GTAAAGGACC TTATCCCATG
AGAGAAGGTA TGAATCTATT CTTAAAGAAT GTTGGAATAA CATTCAGAAG GGACGGAGAG
ACAAAGAGAC CAAGGATAAA CAAGCCCGGA AGCTATACAG ATAGGGAGCA GAAGGAAAAG
GGTGAATATT ATTACGCATA A
|
|---|
| Protein sequence | MHIAVVLQDR CQFKKCNYEC RLYCPPVRMG IDTVVITEKG YPKIIEELCE GCGICVHKCP
FEAVKIVGLP EELKEELVHQ YGENGFRLYR LPQIKQGKVV GILGPNGVGK TTSLNILSGN
LIPNLGNYEK KPSWDDVIDY FSGNVMADYF SKLRDGEIKT ALKPQYVDKI PRVFKGKVKE
LLKNVNEDIS EVASLLKIEN ILDRDVDKLS GGELQSVAIA ATMLKDADVY FFDEPSSYLD
IDQRLEIARI IKDLAEKKIV FVVEHDLAVM DFIADVVHIL YGSEGAYGVV SQIRATRNAI
NSFLEGYLRE ENIRFRPWKI EFTEHPPKRS LELPTLIKWP YIEKKYENFK LEVEPGEIKI
GEVVGVVGPN ATGKTTFVKI LAGVIKADRG EINEEVKVSY KPQYIKPQYD GTVEELLMFT
FKDRMSNSFF LSEVINPLGI KHMYNKDVNA LSGGEMQRLA IAICLGLEAD LYLLDEPSAY
LDSNQRMIAA KVIRRVMENT GKSALVVDHD VYFIDIVSDD VMVFGGEPAR HGIGKGPYPM
REGMNLFLKN VGITFRRDGE TKRPRINKPG SYTDREQKEK GEYYYA
|
|---|
| |