Gene Aboo_0310 details

Gene Information

• Locus tag: Aboo_0310
• ID: 8827252
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 307598
• End bp: 313819
• Gene Length: 6222 bp
• Protein Length: 2073 aa
• Translation table: 11
• GC content: 39%
• Product: Oligosaccharyl transferase STT3 subunit
• Protein accession: YP_003482683
• Protein GI: 289595987

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTACGGA ACAAATTTAA ATTTGATATA AACAGAACAA CAGTGCTTGT CGTTGTAGCT 
TTGGCATCTA TTATGGCCTT GGGATTTTTT ATAAGGGTGT ACTGGGCCAT AGGACCATCT 
ATTCAGTACG GCTATTCTGT ATCTGGCGGG TCTGATTCAT ACTATCATGA AAGAATCCTT 
AATTATATTC TCACATCTAA GCATCAATTA TTAAATGACC CTATGCTCAA TTACCCTATG 
GGTTTAGATA ACCCTAGGCC TCCCCTATTC CATTGGGCAA TAATACTGGC CAGTATGATA 
TTCTACCCGT TCCTAAACGC ATACGATTCA GCAGTTCTTA TGCTAATCCT ATTTCCAGCA 
ATATGGGGAA CACTGACATT AATACCTGTA TATCTGCTGG GTAAGGAAGC TTTCAACAGG 
AAAGTTGGAT TGGTGGCTGC ATTCTTCCTA GCCATAATGC CTGCAAACAT AATGAGAAGT 
GTCGCCACTC AGGCAGACTG GGATGCCTTT GATCTATTTT TCATAACTTG GATGTTCTAT 
TTCTTCCTGA TCGCTTTAAA AACAACAAAA TCAAAGAACT GGATTAAAAA CTGGTTCAAT 
AAAGATGACC TCAAGCATGG GGTTTCAGTA TTTATTAGAG AGAATAAAAA ACCCATTGTC 
TATAGCGCCC TAGCAGGTGC TTCATTAGGC GCCCTTGCCC TAGCTTGGAA AGGATACACA 
TATGCCCTCT CAATCTTAGC AATATATCTG GTTATCCAAG TTATAATAAA CAGATTAAGA 
AACAGGTCCA ATTTCCATAT TTTAGTATTC ACCGCCATAT ATACAATAGT TGGATTTCTA 
ATGGCATTCC CCTGGTACTT TGTAACTCAT AGGCTTGGTA GTTGGTATGA GATACCACTC 
ATCGTAATAC TTATTCCTCT ATTCACAGCC CTATACTTTG AAATGACCTC AAAGTACCCG 
TGGCCCTTCG TATTCCTTGC AGGAGGCATA GGTTTTGGAG TATTTGCCGT TATCCTAAAT 
GTGTTCTTCC CAGATGTATG GGGCAAGCTT GTGAGCGGAC AGGGCTATTT TGTGCATAGT 
AAACTATATT CAACCATTGC AGAGGCGCAG CCAGCAACTA TGGGAGTCCT AAGCATGTCC 
TTCGGCATAG GCATATTCCT TCTATCCATC ACCGGAGTTT TCTATCTCAT CTACCTACTC 
AAAAAGAGGT TAAGCGAGCA TTACATATTC TTCGTTATTT ACACCAGCAT AGCCATATTC 
ATGGCAATTT CTGCAGCGAG GTTTATGTTT AATGCATCAC CTCCTGTGGC GCTCACTGCA 
GCAGTATCTT TAATCTGGCT CATAGATCTG GTTGATATCA AAAAATCCAT GGAAGAATTC 
AAGAAATATC GGGGCTCATG GAGAAAGGCA TTGAAGAGAA ATATAAAAAT TTCTCAAATT 
ACTGTAATAC TCGTAATAGC ATTTCTTGTG ATATTTCCTA CCGTTTGGTA CGCTGTTGAT 
GCTGGAATAC CTTATGAAAC CAAAGATAAA TTCGACAAGC AAATATACAA CAGCATGCCC 
TCGTTTATGA GACCCAATGA GACAACTTAC AACAAATCGT CCCCATGGTA TTTGGGAGCA 
TTTGGCTATT CTATTCCAAA GCCAGAATAT CCATGGCAAC GGGCTTGGAA ATGGTTAAGT 
GAGCAAGATA ATTCTACGCC ACCAAAGGAC CGTCCTGCAT TTCTTTCTTG GTGGGACTAT 
GGATTCCAAG CTGTAGCACA GGGCAAGCAT CCCACAGTGG CAGATAACTT CCAAGATGCT 
TACAGATTCG CCGCCCAGGT TATAACGGCT CAAAATGAAA GTGAAGTGAT CTCCCTATTC 
ATCGCAAGAT TTTTAGAGGC AGATTTCCAC AAAAATGGAG GCACATTGAG CCAGCCCATT 
ATGAATGCCC TCATAAAGTA TGCTGGGCAA GATAAAGCAA ATAAAATTAT TGATATTTTA 
AATGACCCAG ATAAATACAG GAGAATAATA ATTGAGAATC CACAAATATA TGGACTTTAT 
TCAAACGACA TAGACTCTAA AAACGCCCTT TATGTGGCAA TAAAGGGCAC ATTAGCATAT 
CTACCTCAAA ATAAACTTAT CTCAATGTAT GATGCTATTA GAAACTCAAC AGGATGGGAT 
ATAAGATACT TCGCCGTGGA CTACCGTCTC TTCCCATTCT CCGGTATGAG AACAGGTATC 
TTCTATGCTC CTGCAAAGTT GGGTGATAGA AGAATATATC AGGCAGGAGG TACAGTGGTA 
CCCTACGATT TCTACGACCT AAAAGCTGTG GATGCCAATG GAAATACTTA TGATATAGAT 
AAAGTACCTG CAAATGCCCA AATTGTGAGT TATAAAATAA TTTACAAACC TATGTTTTAC 
CATTCTCTGC TATATCGCAC CTTCATAGGT TATTCTGGAG AGGATATTGG TAAGGGAAAT 
GGAATACCTG GATTCTCGCC AGATCTTGGA AGCTACCAAC CTATGCAAGC CTGGAACATG 
ACACATTTCA AGTTGGTTTA CAAAACAGCA TACTGGAATC CGTATAAGGA TTATAAAAAT 
CACACCAAAG CATGGAAGCC CATACCAATA GAGCTGGCGT TGAAATATAA GAGAGAGGGA 
AAGGGTACTG TGGAATTGAA CCCTCCTGCT TATCAAGTAT TGCCCAACGA TGTGGTAATT 
GTGAAATTCT ACGAAGGTGC CGTAATACAG GGATATATAA GATTATCCAC AGGAGAGCCT 
CTTAAGCATA TAAGGGTGAC TATTTTCGAT GAATATGGTA TACCCCATGC TACAACTTTC 
ACCAACGATA CAGGATATTT CAAACTTCTA TCTGTAGCAG GGAACATAAC CTTGGTGGCA 
TCTACAGATG GACATTATGA TAAGCTAAGG ATGATTGATA AAACAATTCT ATATCACACC 
TTGATTAATG TAAGCCAAGA GCAGGCAATG CGCTTAAAAC CCAATTTTGT GATCACAAAG 
AATATTACAA TAAAACCCGC AACCCTCGAT GGCGTTGTTT ACTACGATAT GAACCATAAT 
AATAAATTTG ATAAGGGAGA TATAAAGCTC AATAATGCAA CATTTATTTT GGAGAACTCA 
ACTTACGGTT ACCATGTTTC TGTACCAATA AAGAACGGAG AATATCAGAT TAAAGATATC 
CCACCACACG AATACAATGT GAATTTGATT ATAAATGGTA AAATGTTTAA GGATGTTGAA 
AAAGTTACAC TCAATACAGG TATGGCTTTA ACAAAAGATA TTGCTCTTAA GCCATCATTC 
ATCAAGGGTT CTGTTACATA TACAAATGGC ACACCTGCAG CAAATGCAAC AATTAAACTT 
ACTGGCTTAT ATTCAAAATA TACGGCTCAT ACAGACCAGA ACGGTAGCTT CAAAGTGCTT 
GTTGTGCCAG ACAATTATAC ATTGGTCGCA AGCAAGCAGG ATTATTACTC AAAGAAATTT 
GATGCTGCTG TTAGTAACTG GAATATGACT GTGAATGAGA ACATTACGCT TACAAAGGGA 
TACACGCTCA GCGGCCATGT GGTTTACAAT GGGGTGCCTA TAGAAAGTGC AGTTGTGAAG 
GTAAAAAGTA TAACTGAATA CAATGTTTAT ATTGCTCAAA CAGATAAAAA TGGAGATTTC 
CGATTACACC TGCCGGGAGG GATATATACA ATATACATAC TCACCACTTA TCAAAATTAC 
AAGATCGCCT ATGTTGGCGT ATTGTCTTTA AATCAAGATA CTTCAAAAGT CATGAGAATG 
GAAAGAGCAT ACGCACTATA TGGTAAAATT ACATCTAAAG AAAAAACCGT TGGAGATATT 
GAGATCTCGC CCTTCAAAGG TGAGACTTTC TCAATGTGGT TCGCAAATCA GACTGGTTAT 
TTCTATATAT ATCTCCCAGA GGGAACATAC TCTATAGGAT TCTTAGGATT TAACAATAGC 
TATAAGCCAT TGTTCAGCAG GGCAATCATA CATCTTAACA AGGATACCGA AATAAATCCA 
ATCTTGCAAA TGGCAGAGAC AATAAAAGGC TATGTATATG CGGGTAAAAA TCAAACACTA 
AAGAATGGGG TAGTTATGCT GAAAGATGAT AAGGGTTATT ATGAAGTACG CAGCATACCC 
CCAGACGGAG AATTTACCCT GGGCTCAACA ATAAATTATC AGTTGGACGC ATTGGTATAT 
GGATATCATA TAACCAAAGT ATACACCCAA GGAAACAAAA AGATTATAAA AGCATCTCCA 
AATGAGGTGG AAATTAGAGG AAATATCTAT GTGAACAATG CAACAAATAG AGTGCCTTTG 
ACAATTAAGT TTATATCTTC TAACAGAACA TACACATTAA CACATGTGAT TGAGAGATAT 
TCTATAAAAG TCTTGCCAGG AGATTACACA ATCGAAATTG TAGGTAACAA CATAGAATAT 
GTCTATGGAA AAATAGTGGC AAAGGCAGAG GTTGGCGAGG CACTGTTACA AAAGGACCTT 
CACATAAAGG CGCTCGCCCA TGTGAATATA GTTTCTCAGG CGGATGTGGT TTACTGGTAT 
CAAAATGGAA CATTGGTGAA AACTGGAAAG GTTGTGGATA TTGCCCCTGG AACATACACA 
TTGTATTTAA GAAATTATGA GAATGCAAGG ATAGTAAGAG TAAGTATAAC ACAAAATACC 
ACTATTGAGG TAAATCTTAA AAGTGCTCAC TTTGTAAATA TAAAGCAAGA GAACTTCACC 
TACATGCTCC CAGTTAAAAT ATCCTCCCCT GCGGGAAATA TCACATGGAA GACCCCAACA 
ATAGCATTGC CTGCTGGGCA TTATACATTT ACCATAAAGG TAAAGAAGAT GGTCTGGGGT 
AAATATTATC TCTATTTCAG TCAAGTTGAT GAATACATAA GCGGCACAAC TACCATAGTG 
TTGCATGTAA CTACAACTCA GATCCTATCC AAGGTATCTG GCATTGTAAC AATTGATAAC 
CGTGGAGCTG CAAATGCAAT AATAAAATTC GTACCTTCAA ATTCTGAGTT GCAAAATGTA 
ACCGTTACCA CAGATTCAGC TGGATATTAT ACAGCAAAAC TAACTCCAGG AGATTATATG 
GTCTATTCAT ACTATGTGAT GGGTGGTAAA AAGTACGCTT ATATTGGAGA GATAAATGCT 
CAAAATTCCC AGAACCTCAA TATTGAATTC CAAAAGGGCT ACTTGCTCTA CGGTGGAGTG 
TATCTAAACA ACTCAAAGGT CTCAGTTATG GTAAATATAG AAACTCCTTA CGGCACACTT 
AGTTATAAGG CAAATGGATA CTATTATGCA ATACTCCCTC AAAACAATTA CACGGTAAGT 
GCCAGCACAT ACCGTATAGA GTATGGACAA AAAGTAGATT ACAAATTCAC AAAGAAAGTT 
AATCTCACGG CAGATACCTC TTTGGATGTT AGGCTTCAAA GACAGAATGT GCATATGATT 
ACCGTTGATA TATTGGGTTA TGATAAGAAT GTAGAGCCCT ACAAGAATAT GTGGATGTTA 
GTCAAACTTA AGAACACTGG AAACTCTCCT GAAAATGTTA AATTCGAGGT ATTTGGACAG 
TGGAAGATAG TCAATCCACA GAGCTATAAA ATGATACCTG GAGATGTTAA AGTCGTGAGT 
TTGGGTCTTA AAGTGCCTTT AATCAAAGCT GGAGATAACG AAGTGCATCT AAGGGTTAAA 
TATACACAGT TCACAGACAA GTACTTCCAT GTGAATGTGG CAAAGTACTA TAATACCTCA 
GCAAATTATT CCCTCGTTTC TTGGAATGAA AATGCCCTCA TATACAGAAT AAAGGTTACG 
AACAATGGAA ATACCTGGGT AAATTACACA TTCTCTGTTC TCAATTCTAA GGAGCTGGAG 
ACGAGGGGAT GGGTCGTCAA AATCTATGGG AAGTTGGGCG AAACAAATCA TCTTAATGTA 
TCTTCTAACA GCGAGGGTTC TATAGAGGTA AGAATAGAAG CAACAAAGAG TAGACCAGGC 
ACCTCTGTGC CGGTACAGAT TGTGGTAAAG GGAATGGGCA AGAGCATCCT AGTAAACCTG 
CCTCTGAAAG AAACATACAT TAAAACATCC TCAGTTTACA TCCAAGCTCC AGGAATTACA 
AACTACACAT CCTTTGAAAT GCAATCTTCC TGGTATGTTC TTTGGGGCCT TACAATTGCA 
ACCTTCGTGG CGTTCATAAT ATTCTGGAGG TGGAAGAAGT GA 

 

Protein sequence

MLRNKFKFDI NRTTVLVVVA LASIMALGFF IRVYWAIGPS IQYGYSVSGG SDSYYHERIL 
NYILTSKHQL LNDPMLNYPM GLDNPRPPLF HWAIILASMI FYPFLNAYDS AVLMLILFPA 
IWGTLTLIPV YLLGKEAFNR KVGLVAAFFL AIMPANIMRS VATQADWDAF DLFFITWMFY 
FFLIALKTTK SKNWIKNWFN KDDLKHGVSV FIRENKKPIV YSALAGASLG ALALAWKGYT 
YALSILAIYL VIQVIINRLR NRSNFHILVF TAIYTIVGFL MAFPWYFVTH RLGSWYEIPL 
IVILIPLFTA LYFEMTSKYP WPFVFLAGGI GFGVFAVILN VFFPDVWGKL VSGQGYFVHS 
KLYSTIAEAQ PATMGVLSMS FGIGIFLLSI TGVFYLIYLL KKRLSEHYIF FVIYTSIAIF 
MAISAARFMF NASPPVALTA AVSLIWLIDL VDIKKSMEEF KKYRGSWRKA LKRNIKISQI 
TVILVIAFLV IFPTVWYAVD AGIPYETKDK FDKQIYNSMP SFMRPNETTY NKSSPWYLGA 
FGYSIPKPEY PWQRAWKWLS EQDNSTPPKD RPAFLSWWDY GFQAVAQGKH PTVADNFQDA 
YRFAAQVITA QNESEVISLF IARFLEADFH KNGGTLSQPI MNALIKYAGQ DKANKIIDIL 
NDPDKYRRII IENPQIYGLY SNDIDSKNAL YVAIKGTLAY LPQNKLISMY DAIRNSTGWD 
IRYFAVDYRL FPFSGMRTGI FYAPAKLGDR RIYQAGGTVV PYDFYDLKAV DANGNTYDID 
KVPANAQIVS YKIIYKPMFY HSLLYRTFIG YSGEDIGKGN GIPGFSPDLG SYQPMQAWNM 
THFKLVYKTA YWNPYKDYKN HTKAWKPIPI ELALKYKREG KGTVELNPPA YQVLPNDVVI 
VKFYEGAVIQ GYIRLSTGEP LKHIRVTIFD EYGIPHATTF TNDTGYFKLL SVAGNITLVA 
STDGHYDKLR MIDKTILYHT LINVSQEQAM RLKPNFVITK NITIKPATLD GVVYYDMNHN 
NKFDKGDIKL NNATFILENS TYGYHVSVPI KNGEYQIKDI PPHEYNVNLI INGKMFKDVE 
KVTLNTGMAL TKDIALKPSF IKGSVTYTNG TPAANATIKL TGLYSKYTAH TDQNGSFKVL 
VVPDNYTLVA SKQDYYSKKF DAAVSNWNMT VNENITLTKG YTLSGHVVYN GVPIESAVVK 
VKSITEYNVY IAQTDKNGDF RLHLPGGIYT IYILTTYQNY KIAYVGVLSL NQDTSKVMRM 
ERAYALYGKI TSKEKTVGDI EISPFKGETF SMWFANQTGY FYIYLPEGTY SIGFLGFNNS 
YKPLFSRAII HLNKDTEINP ILQMAETIKG YVYAGKNQTL KNGVVMLKDD KGYYEVRSIP 
PDGEFTLGST INYQLDALVY GYHITKVYTQ GNKKIIKASP NEVEIRGNIY VNNATNRVPL 
TIKFISSNRT YTLTHVIERY SIKVLPGDYT IEIVGNNIEY VYGKIVAKAE VGEALLQKDL 
HIKALAHVNI VSQADVVYWY QNGTLVKTGK VVDIAPGTYT LYLRNYENAR IVRVSITQNT 
TIEVNLKSAH FVNIKQENFT YMLPVKISSP AGNITWKTPT IALPAGHYTF TIKVKKMVWG 
KYYLYFSQVD EYISGTTTIV LHVTTTQILS KVSGIVTIDN RGAANAIIKF VPSNSELQNV 
TVTTDSAGYY TAKLTPGDYM VYSYYVMGGK KYAYIGEINA QNSQNLNIEF QKGYLLYGGV 
YLNNSKVSVM VNIETPYGTL SYKANGYYYA ILPQNNYTVS ASTYRIEYGQ KVDYKFTKKV 
NLTADTSLDV RLQRQNVHMI TVDILGYDKN VEPYKNMWML VKLKNTGNSP ENVKFEVFGQ 
WKIVNPQSYK MIPGDVKVVS LGLKVPLIKA GDNEVHLRVK YTQFTDKYFH VNVAKYYNTS 
ANYSLVSWNE NALIYRIKVT NNGNTWVNYT FSVLNSKELE TRGWVVKIYG KLGETNHLNV 
SSNSEGSIEV RIEATKSRPG TSVPVQIVVK GMGKSILVNL PLKETYIKTS SVYIQAPGIT 
NYTSFEMQSS WYVLWGLTIA TFVAFIIFWR WKK