Gene Aboo_0305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0305 
Symbol 
ID8827247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp302770 
End bp303741 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content40% 
IMG OID 
ProductCRISPR-associated protein Cas4 
Protein accessionYP_003482678 
Protein GI289595982 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATTACA TTTCTGCAGG AGACATTGAA AAGTACTCGT ACTGCCCATT GAGCTGGTGG 
CTGAGCAGGA ATGAAAAGCA TAAGGAAAAT GAGGGTGTGA GAAGGCACAG GGAAATCAGC
AAGGGAGCTG CAGATATGAA GAAAAAATAC AAACAGATGA AAGAGTTTGA GAGCATGGCC
ATTTATTTTT CCATAGGTGC CACAATAATA TCTCTTGTGG GCATATCCTT CATATACACT
TCACCCATAC TAAGCAGGAT GTTCATTCTT TTCTCAATTT TATGGCTGGG CTTCTCCTTT
TATTTGCTAT GGAAGGCAGA TAAATATGCT ATTTTAGTGG AGAGAAAAAA TGCAGAGAGA
ATTATGGTTA TAGCATCGGC AGCAGCCACA ACATTCTCGA TATTTTCGGT AACATTCATT
CTTCCCCCAA ATTACACCCT CGGCTATGTT CTGGAAGTTC TATCCCTCCT ATGGCTCGTA
TTTGCCACTT ATTTTCTCTA TATGGCTATG AAAAGAGATA TCCAATACAA TGAGATTAAG
AAAAAACTAC AGCTTCCAGA TGGGGAAATT GTATACATTG ATGATTTGCA AAAGAGCCCC
ATACTGAAAA GCGAGAAATA CAAAATATGG GGAAGACCTG ATTTACTCAT AAAAATGGGA
GATGATTATA TTCCAGTGGA AATAAAGACA GGTAGAGTGC CCAGGGGCCC GCATTTTTCG
CATATTATGC AACTTACAGC ATACATGGTG CTTGTGGAGG AAAATTACAA GACTCCACCT
TATGGATTAC TCAAATATGG TCCAGTGATA TATAAAATTG AATATGAGGA GGACTTGAAG
AACATAATGC TCCAAAAGGT AAAGGAGATG AGGGAAGCGC TGAAAACTGG AGAGGTGCAT
AGGAATCATA ACAAAGTTGG AAAATGCCTG CACTGCTCTC GCAGAGAACT GTGTCCAGAG
AGATTGAGTT AG
 
Protein sequence
MDYISAGDIE KYSYCPLSWW LSRNEKHKEN EGVRRHREIS KGAADMKKKY KQMKEFESMA 
IYFSIGATII SLVGISFIYT SPILSRMFIL FSILWLGFSF YLLWKADKYA ILVERKNAER
IMVIASAAAT TFSIFSVTFI LPPNYTLGYV LEVLSLLWLV FATYFLYMAM KRDIQYNEIK
KKLQLPDGEI VYIDDLQKSP ILKSEKYKIW GRPDLLIKMG DDYIPVEIKT GRVPRGPHFS
HIMQLTAYMV LVEENYKTPP YGLLKYGPVI YKIEYEEDLK NIMLQKVKEM REALKTGEVH
RNHNKVGKCL HCSRRELCPE RLS