| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0240 |
|---|
| Symbol | |
|---|
| ID | 8827182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 242608 |
|---|
| End bp | 243969 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | |
|---|
| Product | nucleotide sugar dehydrogenase |
|---|
| Protein accession | YP_003482614 |
|---|
| Protein GI | 289595918 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.836377 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAA AAGATTGGAC AAAAATGTTC TATAAGAAAC TCCAAGATAA TAATTTGAAA
ATAGCCATTG TTGGGCTGGG ATATGTGGGA TTACCTCTGG CTCTAGCTTT TGCAAAGAAG
TACGAAGTTT ATGGGTTTGA TGTGGATAAA AACAAGATTG GTATGCTCAA TAAAGCTCAA
AGCTATATAG TGGATGTGAG CTCTGAAGAT CTTATAAAAT TTTTACACAA GAGCTTTTAT
CCTTCAGCAG ATGATAATAT TTTAGATAAG GCAGATGCCA TATTCATCAC GGTACCTACT
CCAGTGCATG TGGATGGCTC TCCCAACATG GACTATGTGA TCTCTGCATC TCAAACTGTA
GCCAAGCATC TTAAGAGTGG TAAGCTTGTA GTCTTAGAGA GCACGGTATA TCCTGGAGCA
ACTAGAGAGG TAGTGATTCC TATCTTAGAA ACTTCTGGGC TTAAAGCGGG TACGAATTTT
GGAGTGGTGT TTTCTCCAGA ACGCGTCACA CCGGGAAACA AAGAGTACAG TGTGGAGAAG
ATGCCTAAGG TTGTTGGAGG TATGGATAAT GAGTCAACAG AACTGGCTTA TATTCTCTAC
TCATCCGTAT TAGAAGCTCC TGTAATAAAG GTGAGCAACT GCAAGACTGC AGAGGCTGTG
AAAGTACTTG AAAACACATT TAGATTCATC AACATATCCC TCGTAAATGA GCTTGCAATG
GTTTTTGAAA ATATGGGTAT AGATATATGG GAAGTTATAA AAGGAGCATC TTCTAAGCCC
ATTGGATTCA TGCCCCATTA TCCAGGTCCC GGAATAGGTG GTCATTGCAT ACCAGTGGAT
CCTCTATTCT TGCTCTACAA GATTAGAAGG TACGATTTAG ATTCTAATTT TATAGAGATG
GCGAGGAAGA TAAACACAAT TATGCCCCTA CATATGGTTA ATCTTGTAGA GTATGGACTT
CGCAAATTTG GTAAAGAGCT AAGAGATTCA AATGTTCTCG TTGCAGGTGT GGCGTACAAA
CCTGAAGTGA ATGATTCCAG AGAATCTCCA GCCTTTGATA TAATTGAAGA GCTTGAGTAT
TCTGGAGCAA AAGTACAGTT TTATGATCCT TATATTGATA GAATTTATAT TAAAGGTAAA
GAGTTCCAAG GATTGAAGAG TATAGGGATA AAAGAACTTA TGCATTACGA TGCTATTGTG
CTAGCGACTA ACCACAAAGC ATTGGTAACG CAGCTTAAAG AGCTCTTGCC GAAACTTGAG
AAGAGCGTAG TTGTTGTGGA TGGACGGAAC TCTCTTGATA CGAGAGAGAT AAGAAAAAAG
CATACATATC TTTGTATAGG TAAGCCTAGA GGTGAGATAT GA
|
|---|
| Protein sequence | MFEKDWTKMF YKKLQDNNLK IAIVGLGYVG LPLALAFAKK YEVYGFDVDK NKIGMLNKAQ
SYIVDVSSED LIKFLHKSFY PSADDNILDK ADAIFITVPT PVHVDGSPNM DYVISASQTV
AKHLKSGKLV VLESTVYPGA TREVVIPILE TSGLKAGTNF GVVFSPERVT PGNKEYSVEK
MPKVVGGMDN ESTELAYILY SSVLEAPVIK VSNCKTAEAV KVLENTFRFI NISLVNELAM
VFENMGIDIW EVIKGASSKP IGFMPHYPGP GIGGHCIPVD PLFLLYKIRR YDLDSNFIEM
ARKINTIMPL HMVNLVEYGL RKFGKELRDS NVLVAGVAYK PEVNDSRESP AFDIIEELEY
SGAKVQFYDP YIDRIYIKGK EFQGLKSIGI KELMHYDAIV LATNHKALVT QLKELLPKLE
KSVVVVDGRN SLDTREIRKK HTYLCIGKPR GEI
|
|---|
| |