Gene Aboo_0200 details

Gene Information

• Locus tag: Aboo_0200
• ID: 8827141
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 211765
• End bp: 212295
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 41%
• Product: 3-isopropylmalate dehydratase, small subunit
• Protein accession: YP_003482574
• Protein GI: 289595878

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.00000367729
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACCTC GCATAATTAA AGGAAGAATA TGGATGATAA GGGACAAAGA TGGGAAAAGA 
ATTGATAACA TTGATACCGA TATGATTTTT CATAATAAAT ACCTCTACAT CACAGATTTG 
AAAGAAATGG GTAAGTATGC GTTTTCCAAT CTTCCAGGCT GGGAGGATTT TCCGAAAAAA 
GCTAAAGAAG GGGATATCTT GATCGTTGGT CGTAATTTCG GTGCGGGAAG CTCTAGGCAG 
CAGGCTGTGG ATTGCTTCAT TGCCCTAGGA ATCTCAGCCA TAATTGGTGA GAGCTTTGGA 
GCAATATACA AAAGGAATGT GATAAACTCT GCTCTTCCCC TCATTGAAGC TCCCGGGATA 
TTTGAATCGG ATTTAAACAG CGGAGATGTC ATTGAGGTAA ACCTCGAAAC CGGGGAGATT 
TTCAAGGACG GAAAAATAAT ATTCAAGGCA AAGCCAATCT CAAAGGTAGC ACTGGATATA 
TACGATGCCG GAGGAATATT CGCATACGGG AAAACATTAG AAAATGCGTA G 

 

Protein sequence

MKPRIIKGRI WMIRDKDGKR IDNIDTDMIF HNKYLYITDL KEMGKYAFSN LPGWEDFPKK 
AKEGDILIVG RNFGAGSSRQ QAVDCFIALG ISAIIGESFG AIYKRNVINS ALPLIEAPGI 
FESDLNSGDV IEVNLETGEI FKDGKIIFKA KPISKVALDI YDAGGIFAYG KTLENA